Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq5080 174 5e-38 >seq5080 Length=249237 Score = 174 bits (192), Expect = 5e-38 Identities = 513/786 (65%), Gaps = 10/786 (1%) Strand=Plus/Plus Query 188777 TTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATG 188836 ||||||| || || || |||||||| | ||||||| ||| |||| ||| | ||| Sbjct 206849 TTGGCCCAACAGGCTCTGGTAAAACCCTGCTTGCTCAGACACTGGCGCGTATTCTGGATG 206908 Query 188837 TACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATG 188896 | ||| | | || | || || || | | |||||||| || ||||| || ||||||| Sbjct 206909 TGCCTTTTACAATGGCAGACGCCACAACCCTGACAGAAGCAGGGTATGTGGGGGAAGATG 206968 Query 188897 TGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAAC 188956 | |||||| | | || | | || ||| |||| ||| || | ||| || | | Sbjct 206969 TTGAAAACATTATTCTCAAGCTGTTGCAGGCATCTGACTACAATGTTGAACGTGCACAGC 207028 Query 188957 GTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCA 189016 |||| ||||| ||||| |||||| | || || ||| | | ||| ||||| | | |||| Sbjct 207029 GTGGCATTGTGTATATTGATGAAATCGACAAGATTTCCAAAAAGTCAGATAATCCTTCCA 207088 Query 189017 TTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTA 189076 ||||||| |||||| ||| ||||| || ||||| || | | || | || ||||| | Sbjct 207089 TTACCCGTGATGTAAGTGGTGAAGGTGTGCAGCAGGCGCTGCTGAAGCTTATGGAAGGCA 207148 Query 189077 CAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAA 189136 |||| || ||||| || || || || || || || || || || || | || || Sbjct 207149 CAGTCGCTTCTGTTCCGCCGCAGGGAGGGCGCAAGCATCCGCAGCAGGAGTTCCTGCAAG 207208 Query 189137 TAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTA 189196 ||||||| || || || ||||||| |||||| || |||| ||| || || || |||| Sbjct 207209 TAGATACCACCAACATGCTGTTTATCTGTGGTGGTGCTTTTGCTGGGCTGGACAAGATTA 207268 Query 189197 TCAAGAGACGCGCTACA-AAATCAACTTTAGGTTTTGATGATAGTGTAGATAAAGTACAA 189255 | |||| || | || |||| || || |||| | ||| | | | Sbjct 207269 TTTCTGCCCGCGGTAAAGGAACCAACATT-GGGTTTGGCGCCGATGTGCGT---GCTCCG 207324 Query 189256 GAAGAAATCAAGGATGACA-ATAAAGTATTCCAACATCTTCAACCGCAAGATATTGTTAA 189314 || || | | |||| || | | || | | ||||| |||| | | || Sbjct 207325 GATGA----GCGTAAGACAGGGGAAATCCTGCACGACGTGGAACCGGAAGACTTGATGAA 207380 Query 189315 GTATGGTTTAATTCCAGAATTTATTGGGCGTGTACCAGTAATCGCAACTCTTAACAAACT 189374 || |||||| ||||| ||||| || |||||| | ||||| |||||||| || | || Sbjct 207381 GTTTGGTTTGATTCCGGAATTCATCGGGCGTCTGCCAGTTATCGCAACGCTGGGTGATCT 207440 Query 189375 TGATCGAGATGCATTGATTAACATTTTAACTGAGCCGCAAAACGCTATCATTAAACAATA 189434 ||| || ||| | || || ||| | || || || | || || | | || || || Sbjct 207441 GGATGAAGCTGCGCTTATCAAGATTCTGACAGAACCCAAGAATGCGTTGGTCAAGCAGTA 207500 Query 189435 TCAGAAATTGTTAGATATGGATGGCGTGGAATTAGAATTCCAAAAAGAAGCATTAGAATC 189494 |||| ||||| | ||||| | ||| || | || || | || ||| | || | Sbjct 207501 TCAGCGTTTGTTCCAGATGGAAGATGTGCAACTGGACTTTACGGATGATGCACTTAAAGC 207560 Query 189495 AATTGCAGATGAAGCGATTGAACGTAATACTGGTGCTCGCGGATTACAATCCATTATTGA 189554 || |||||| || |||| || || ||||| ||||| || ||| |||||| | || Sbjct 207561 CATCGCAGATCGCGCTATTGTGCGAAAGACTGGGGCTCGTGGGCTACGCTCCATTCTGGA 207620 Query 189555 AAATAT 189560 || ||| Sbjct 207621 AAGTAT 207626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591799668204992