Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq5375 84.2 4e-11
>seq5375
Length=646746
Score = 84.2 bits (92), Expect = 4e-11
Identities = 170/250 (68%), Gaps = 2/250 (1%)
Strand=Plus/Plus
Query 183037 CAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAA 183096
||| | ||| || || | || || || ||||| | || || || ||||||||||| |||
Sbjct 627741 CAACTGCAGCTGGTGCGCGAGGGCAAGATGCACGGCTTCTTGCGCATGTACTGGGCCAAA 627800
Query 183097 AAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGTATCTATATGAAC 183156
||||| || |||||||| || |||||| || || || ||| | |||
Sbjct 627801 AAGATTCTCGAATGGACCGCCACGCCGGAACTGGCGCTGGAGTACGCGATCCTGCTAAAC 627860
Query 183157 AATAAGTACGAACTAGACGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTAT 183215
| |||||| || || || ||| ||||| ||||| ||||| || || |||||||| ||
Sbjct 627861 GACAAGTACAGCCTTGATGG-ACGCGATCCCAACGGCTACGTGGGCTGCATGTGGTCCAT 627919
Query 183216 TTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATAT 183275
|||| | ||||||| | ||||| || | | || || || ||| | | || ||
Sbjct 627920 CGGCGGCGTCCACGATATGGGATGGAAGGAGCGCGCCATTTTCGGCAAGGTTCGGTACAT 627979
Query 183276 GAATTATGAG 183285
||| ||| ||
Sbjct 627980 GAACTATCAG 627989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903349892257440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |