Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq5080 82.4 2e-11 seq4241 80.6 8e-11 >seq5080 Length=249237 Score = 82.4 bits (90), Expect = 2e-11 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 8568 AGCGGGTATGGTGGAATTGGTAGACACGCTTGGTTTAGGTCCAAGTGCCTGAAAAGCTTG 8627 ||||||| ||||||||||||||||||||| | ||||||| | ||| | | || | || Sbjct 204037 AGCGGGTGTGGTGGAATTGGTAGACACGCCAGATTTAGGTTCTGGTGAC-GCAAGTCGTG 204095 Query 8628 GGGGTTCGAGTCCCTCTACCCGCACCA 8654 ||||||| |||||||| ||||| |||| Sbjct 204096 GGGGTTCAAGTCCCTCCACCCGTACCA 204122 >seq4241 Length=507456 Score = 80.6 bits (88), Expect = 8e-11 Identities = 70/86 (81%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 8569 GCGGGTATGGTGGAATTGGTAGACACGCTTGGTTTAGGTCCAAGTGCCTGAAAAGCTTGG 8628 |||||| ||||||||||||||||||||| | ||||||| | ||| | | || | ||| Sbjct 457656 GCGGGTGTGGTGGAATTGGTAGACACGCCAGATTTAGGTTCTGGTGGC-GCAAGCCGTGG 457714 Query 8629 GGGTTCGAGTCCCTCTACCCGCACCA 8654 |||||| |||||||| ||||| |||| Sbjct 457715 GGGTTCAAGTCCCTCCACCCGTACCA 457740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146166576124640