Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq4674 114 1e-20 >seq4674 Length=694708 Score = 114 bits (126), Expect = 1e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 5333 AGAAGCACTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTT 5392 ||| || |||||| |||| ||| || | ||| ||||| ||| |||| ||||| | | | Sbjct 523826 AGATGCGCTCGCAAATGAACTGGGCGATGCGATCGCCGCGCTTCACCTCGAAGTCCACGT 523885 Query 5393 GGCCGAAG--TTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCC 5450 |||| ||||||||||| || || ||||| || ||| | ||| |||||| ||||| Sbjct 523886 --CCGAGTGATTGAAGAGCACGACGCCGAGGTTGCCGCGGTAATCCTCGTCCACCACGCC 523943 Query 5451 CGCTCCCACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTA 5510 || |||||||| | |||||| || || || || || || | || || ||||| ||||| Sbjct 523944 GGCGCCCACATCGATGAAGTTCTTCACGGCCAGTCCAGAGCGTGGAGCAACGCGGCCGTA 524003 Query 5511 GCAGCCGTATGGCGGGTGGATCTGCAGATCGGTC 5544 | |||| | || || | |||||| |||||| Sbjct 524004 GGAGCCCTCCGGAACCTGCACCTGCAGGTCGGTC 524037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447780810412440