Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq5277 91.5 1e-13 >seq5277 Length=7425378 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 25164 AATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAG 25223 ||| || ||| ||||| | ||||| || || || || || || | || || | || | Sbjct 1192773 AATAAATCAAAATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATTACTTTGGAGG 1192832 Query 25224 TCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATAC 25283 |||| | |||||| || ||| | || || || ||| || || ||||| || | Sbjct 1192833 TCGAGCCTTCCGATACGATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTC 1192892 Query 25284 CGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCA 25343 | || |||||||| |||| || | | |||||| || || ||||||| | | | | Sbjct 1192893 CCCCAGATCAGCAGCGACTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTTT 1192952 Query 25344 GCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||| ||||| |||||||||||| |||| || || Sbjct 1192953 CCGATTACAACATTCAGAAAGAATCCACCCTTCACTTGGT 1192992 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || |||||||||||| | ||||| | || || ||| | Sbjct 1193468 ATGCAAATCTTCGTGAAGACCTTAACCGGAAAAACCATCACTCTGGAGGTTGAACCTTCT 1193527 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || ||| | || || || ||| || || ||||| || || || |||||| Sbjct 1193528 GATACCATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGATCAG 1193587 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || | |||| | |||||| || || || |||| ||| | ||| ||||| Sbjct 1193588 CAGCGATTGATTTTTGCCGGCAAGCAGCTTGAGGATGGACGAACCCTATCCGACTACAAC 1193647 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || ||||| ||||| ||| |||| || || Sbjct 1193648 ATCCAAAAGGAATCGACCCTTCACTTGGT 1193676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445064194781280