Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq5074 280 2e-70
>seq5074
Length=4358836
Score = 280 bits (310), Expect = 2e-70
Identities = 473/677 (70%), Gaps = 22/677 (3%)
Strand=Plus/Plus
Query 146841 GAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTC-GGGGGT 146899
||| || || ||||||| ||| | | | ||| ||||||||||| |||| || ||
Sbjct 1652252 GAAGTCTTCGATGTCCTGCACTTGACGCTTGATCAACAGCTTGGGGAATGGTCTCGGCGT 1652311
Query 146900 TC-CTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCC 146958
|| || ||||||| ||||| ||||||||||| || ||||||||||||| ||| |||
Sbjct 1652312 TCGCT--CCAGCTGCTCCTTCAGCGGCTCCACGTGATTCAGGTAGACGTGCGTGTCGCCC 1652369
Query 146959 AGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGC 147018
| ||||||||||||||| || ||||| || || || || ||||| | ||||| |||||||
Sbjct 1652370 ATGGTGTGCACAAAGTCGCCTGGCTTCAGACCCGTTACATGGGCGATCATGTGGGTGAGC 1652429
Query 147019 AGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTAC 147078
|| | |||| ||| ||||||||||| || ||||| |||||||| | ||| ||||||
Sbjct 1652430 AGGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAGACCCATGTCGGCGCTCCTTTGGTAC 1652489
Query 147079 AGCTGGCACGAGAGCTCCCCG------TCGGCCACGTAAAACTGGCACAGGATGTGGCAC 147132
|||||||| ||||| || ||| | || || || ||||| |||| ||| |||
Sbjct 1652490 AGCTGGCAGGAGAGTTCGCCGCGCGTCTGGGAGACATAGAACTGCGCCAGGCAGTGACAC 1652549
Query 147133 GGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTG 147192
|||||||| ||||| || | ||||| || ||||| ||||| | | | ||||||
Sbjct 1652550 GGCGGCAGGGCCATTTTCGGAATGTCCGATGGATTCCATGCCGACATGATGATGCGCCTG 1652609
Query 147193 CTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCC 147252
| ||| || || || ||||| ||| | || ||| || | ||||| ||
Sbjct 1652610 TCCGAGGGATTATTCCGGATGGTGTCGATCACCTGTCGCAACTGATCGATGCCCTTTCCA 1652669
Query 147253 CCGTAGTTTGTC-CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTA 147311
|||| | ||| ||||| | ||| || |||||||||| |||||||||||||||
Sbjct 1652670 GTGTAG-TCGTCATCGCAGGTGCCATACTCCGCTCCAAAGTGCCGCCACTGGAAGCCGTA 1652728
Query 147312 CACTGGCCCCAGGTCGCC--GGGCTTTCTGTGCGAGAAGCCCGCCCGCTTG---AGAAAC 147366
||| || ||||| || || ||| || | | | | || ||||| || |||
Sbjct 1652729 CACCGGGCCCAGATCTCCAACGGCACGCTCCGTGTG-----CCCCAGCTTGTCCAGGAAC 1652783
Query 147367 TCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCC 147426
|| || | || ||||||||||| ||| |||||| ||| ||| | |||
Sbjct 1652784 TCCCTGGTGCTGTTCCCGTCCCAGATGTGCACGTTCTTGGCCTGCAGCAGCTTGGCATCC 1652843
Query 147427 GTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTG 147486
|| |||| | |||||||||||||||||| ||| | | | ||||| | ||||
Sbjct 1652844 GTCTTGCCCGCCACGAACCAGAGCAGCTCCTCGGCCACCGCGCGGAAGAAGACGCGCTTG 1652903
Query 147487 GTGGTCAGCAGGGGGAA 147503
|||||||||| |||||
Sbjct 1652904 GTGGTCAGCAAAGGGAA 1652920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583448403045600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |