Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq5277 86.0 5e-12 >seq5277 Length=7425378 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||||| || ||||| || || |||||||||||||||||||| |||| || || Sbjct 1192781 AAAATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATTACTTTGGAGGTCGAGCCT 1192840 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 |||| | ||| | ||||| || ||| ||||| || ||| | ||| ||| Sbjct 1192841 TCCGATACGATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGAT 1192900 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 || || | || || | ||| ||||| || | |||||| ||| | ||||||| Sbjct 1192901 CAGCAGCGACTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTTTCCGATTAC 1192960 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGT 106468 ||||| || |||||||| || || || || || Sbjct 1192961 AACATTCAGAAAGAATCCACCCTTCACTTGGT 1192992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402302979484832