Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_026928.1
Length=189418
Score E
Sequences producing significant alignments: (Bits) Value
seq5078 86.0 8e-12
seq4424 86.0 8e-12
seq4241 82.4 9e-11
>seq5078
Length=1488007
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 18754 TGGGGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTCAA 18813
|| || |||||||||||||||||||||||| ||||||||||| ||| |||| |||||| |
Sbjct 1125975 TGCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGA 1126034
Query 18814 GTCCCATCAATCCCG 18828
| ||| ||| || ||
Sbjct 1126035 GCCCCGTCACTCGCG 1126049
>seq4424
Length=98381
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 18754 TGGGGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTCAA 18813
|| || |||||||||||||||||||||||| ||||||||||| ||| |||| |||||| |
Sbjct 55369 TGCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGA 55310
Query 18814 GTCCCATCAATCCCG 18828
| ||| ||| || ||
Sbjct 55309 GCCCCGTCACTCGCG 55295
>seq4241
Length=507456
Score = 82.4 bits (90), Expect = 9e-11
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 154423 CGAATAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCCT 154482
||| |||||||| |||||||| ||| ||||||| ||||| |||||||||||||||||||
Sbjct 464635 CGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGTCGGGGGTTCGATCCCCT 464694
Query 154483 CTTCG 154487
| |||
Sbjct 464695 CATCG 464699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605968474673520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |