Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq5277 203 4e-47 seq4488 176 5e-39 seq5074 174 2e-38 seq4172 170 2e-37 seq5214 167 3e-36 seq5242 84.2 2e-11 >seq5277 Length=7425378 Score = 203 bits (224), Expect = 4e-47 Identities = 181/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| | ||||| || || || ||||| |||||||| | | Sbjct 1193468 ATGCAAATCTTCGTGAAGACCTTAACCGGAAAAACCATCACTCTGGAGGTTGAACCTTCT 1193527 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| ||||||| || ||||||||||||||||| ||||| ||||| ||| Sbjct 1193528 GATACCATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGATCAG 1193587 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | |||||||| || ||||| || ||||||| || |||||| | ||||| || Sbjct 1193588 CAGCGATTGATTTTTGCCGGCAAGCAGCTTGAGGATGGACGAACCCTATCCGACTACAAC 1193647 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| || ||||| | ||| | |||||||||||||| Sbjct 1193648 ATCCAAAAGGAATCGACCCTTCACTTGGTCCTCCGTCTTCGCGGTGG 1193694 Score = 203 bits (224), Expect = 4e-47 Identities = 181/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || ||||| |||||| | | Sbjct 1193696 ATGCAGATCTTCGTGAAGACCTTAACTGGCAAGACCATCACCCTTGAAGTTGAGCCCTCT 1193755 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||||| |||||||||||||||||||| ||||| ||||| ||| Sbjct 1193756 GATACCATTGAGAATGTAAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCAGATCAG 1193815 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||||||||||||||| ||||||| ||| || || | ||||| || Sbjct 1193816 CAGCGTCTCATTTTTGCTGGTAAGCAACTGGAGGATGGTCGCACTCTTTCCGACTACAAC 1193875 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| | || | |||||||| ||||| Sbjct 1193876 ATCCAGAAGGAGTCTACCCTTCACTTGGTTCTTCGTCTTCGTGGTGG 1193922 Score = 203 bits (224), Expect = 4e-47 Identities = 181/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||| || || || ||||| ||||||||| | | Sbjct 1193924 ATGCAAATCTTCGTGAAGACCCTGACCGGTAAAACCATAACTCTGGAGGTTGAGCCCTCT 1193983 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || ||||||| || || |||||||| ||||| ||||| ||||| ||| Sbjct 1193984 GATACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCAGATCAG 1194043 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| |||||||||||||| ||||||| |||||| | | ||||| || Sbjct 1194044 CAGCGTCTCATTTTCGCTGGTAAGCAACTGGAGGATGGCCGTACCTTGTCGGACTACAAC 1194103 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || |||||||| || | || ||||||||||| ||||| Sbjct 1194104 ATCCAGAAAGAGTCCACTCTGCACTTGGTGTTGCGTCTTCGGGGTGG 1194150 Score = 187 bits (206), Expect = 3e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || |||||||| ||||| || ||||| ||| || | Sbjct 1194152 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAGACCATTACACTGGAGGTGGAGCCATCT 1194211 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 1194212 GACACCATTGAGAATGTGAAGGCTAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 1194271 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || ||||| || ||||| | ||||| | || || || | || || || Sbjct 1194272 CAGCGTTTGATCTTTGCCGGCAAGCAGTTGGAGGACGGACGCACTCTGTCCGATTACAAC 1194331 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| |||||||| || ||||| | || | ||||| ||||| ||| Sbjct 1194332 ATCCAGAAGGAATCGACCCTTCACTTGGTGCTCCGTCTACGCGGAGGA 1194379 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || ||||| |||||||| | | Sbjct 1193012 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTGGAGGTTGAACCTTCT 1193071 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || ||||||| || || ||||||||||| || || || ||||| ||| Sbjct 1193072 GATACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCAGATCAG 1193131 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||||||||||||||| ||||||| ||||| | | || || || Sbjct 1193132 CAGCGTCTCATTTTTGCTGGTAAGCAACTGGAGGATGGCCGTACGTTGTCGGATTACAAC 1193191 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || ||| | || | || ||||||||||| ||||| Sbjct 1193192 ATCCAGAAGGAGTCGACTTTGCACTTGGTGTTGCGTCTTCGTGGTGG 1193238 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| |||||||| || || || ||||| |||||||| | | Sbjct 1193240 ATGCAAATCTTCGTAAAGACCCTTACCGGTAAAACCATCACTCTGGAGGTTGAACCTTCT 1193299 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1193300 GATACCATTGAGAACGTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGATCAG 1193359 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || || || | || |||| ||| || || | ||||| || Sbjct 1193360 CAGCGTCTCATCTTCGCAGGAAAACAGTTGGAAGATGGTCGCACTCTTTCCGACTACAAC 1193419 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| | || | ||||| || ||||| Sbjct 1193420 ATCCAGAAGGAGTCTACCCTTCACTTGGTTCTTCGTCTGCGAGGTGG 1193466 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| | || |||||||| |||||| | ||||| ||| | Sbjct 1192783 AATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATTACTTTGGAGGTCGAGCCTTC 1192842 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| ||| ||||||| || ||||||||||||||||| ||||| ||||| || Sbjct 1192843 CGATACGATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGATCA 1192902 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || ||||| || ||||| || || |||| ||||| || | || || || Sbjct 1192903 GCAGCGACTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTTTCCGATTACAA 1192962 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || |||||||| ||||| | || | ||||| || ||||| Sbjct 1192963 CATTCAGAAAGAATCCACCCTTCACTTGGTTCTCCGTCTCCGTGGTGG 1193010 >seq4488 Length=533506 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || || ||||||||||| || || | ||||| ||| | Sbjct 135305 ATGCAGATCTTTGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCC 135364 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| |||||||||| ||||||||||||||||| ||||| ||||| ||| Sbjct 135365 GACACCATCGAGAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATTCCCCCAGATCAG 135424 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||||| ||| ||||| | ||||| || Sbjct 135425 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGTCGGACTACAAC 135484 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || ||||| || | || || |||||||| Sbjct 135485 ATCCAGAAGGAGTCGACCCTCCATCTGGTGCTCCGCCTGCGCGGTGG 135531 >seq5074 Length=4358836 Score = 174 bits (192), Expect = 2e-38 Identities = 306/444 (69%), Gaps = 4/444 (1%) Strand=Plus/Plus Query 31961 AGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACG 32020 |||| || ||||| ||| || || || ||||| |||||||||||||| | | Sbjct 3524378 AGCGCTCTATTCCCAGTCTGGTCGATGGGCTGAAGCCCGGCCAGCGCAAGGTGATGTTCA 3524437 Query 32021 CCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGG 32080 ||||| |||||| |||| | |||| ||||||| || ||||| || || | |||| Sbjct 3524438 CCTGCTTCAAGAGGAACGACAAGCGTGAGGTGAAGGTCGCCCAGCTATCCGGTTCGGTGG 3524497 Query 32081 CAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTG 32140 ||||| ||||||| || |||||||||| ||| | ||| ||||| || || || | Sbjct 3524498 CAGAGATGTCGGCCTACCATCACGGCGAGGTCTCGTTGCAGATGACCATCGTGAATCTGG 3524557 Query 32141 CTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGA 32200 | ||||||||||| || ||||| ||| | || | || |||||| || ||||| || | Sbjct 3524558 CCCAGAACTTTGTGGGCGCAAACAACATCAATCTGCTGGAGCCACGCGGTCAGTTCGGTA 3524617 Query 32201 CCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACC--CGTCTCGC 32258 | || | | || ||||||||| || ||| | |||||||| |||||| | || | Sbjct 3524618 CTCGCTTGACGGGCGGCAAGGATTGCGCCAGCGCTCGTTACATTTTCACCATAATGTCTC 3524677 Query 32259 ACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGA 32318 ||| |||||| ||| | | | || | ||||||| || |||| | ||| | | || Sbjct 3524678 CCCT--GACGCGACTGATCTACCATCCCTTGGACGATCCGCTGCTGGATTACCAGGTGGA 3524735 Query 32319 TGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAA 32378 || || ||| ||||||| ||| ||| || | | |||||| || || | || Sbjct 3524736 CGATGGCCAGAAAATCGAGCCCTTGTGGTACTTGCCCATCATACCGATGGTCCTGATCAA 3524795 Query 32379 CGGTGCAGAAGGCATCGGAACGGG 32402 ||| || || || |||||||| || Sbjct 3524796 CGGCGCCGAGGGTATCGGAACTGG 3524819 >seq4172 Length=1033301 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| || ||| | ||||| ||| | Sbjct 906966 ATGCAGATCTTTGTCAAGACTCTCACAGGCAAGACCATCACTTTGGAGGTCGAGCCTTCC 906907 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| ||||||| || || ||||||||||| ||||| || ||||| ||| Sbjct 906906 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCAG 906847 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || || || ||||| || ||||||| || || || | ||||| || Sbjct 906846 CAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGATGGACGCACTCTGTCCGACTACAAC 906787 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||| | ||| | ||| ||||||| || ||||| Sbjct 906786 ATCCAGAAGGAGTCCACTTTGCATTTGGTCCTGCGTCTGCGTGGTGG 906740 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | ||||||||||| || ||| | ||||||||| | Sbjct 907194 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACTTTGGAGGTTGAGCCTTCC 907135 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || ||||||| || || ||||||||||||||||| || ||||| ||| Sbjct 907134 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAG 907075 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||| || || ||||| || ||||||| || || || | ||||| || Sbjct 907074 CAGCGTTTGATTTTCGCCGGAAAGCAGCTGGAGGATGGACGCACTCTGTCCGACTACAAC 907015 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| |||||| | ||| | || ||||||| || || || Sbjct 907014 ATCCAAAAGGAGTCCACTTTGCATTTGGTTCTGCGTCTGCGTGGAGG 906968 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| | || |||||||| || ||| | ||||||||| | Sbjct 907650 ATGCAAATTTTCGTGAAGACTTTGACTGGCAAGACCATCACTTTGGAGGTTGAGCCTTCC 907591 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| ||||||| || || |||||||||||||||||||| ||||| ||| Sbjct 907590 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCAG 907531 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||| || || ||||| || ||||| | ||||| | | || ||||| Sbjct 907530 CAGCGTTTGATTTTCGCCGGAAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTATAAC 907471 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || ||||| | ||| ||||||| || || || Sbjct 907470 ATCCAGAAGGAATCGACCCTTCACTTGGTCCTGCGTCTGCGTGGAGG 907424 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || ||| | ||||||||| | Sbjct 907422 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACTTTGGAGGTTGAGCCTTCC 907363 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| ||||||| || || |||||||||||||||||||| ||||| ||| Sbjct 907362 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCAG 907303 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || || || ||||| || || |||| |||||| | | || ||||| Sbjct 907302 CAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAAGATGGACGTACCTTGTCCGATTATAAC 907243 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||| | ||| | || | ||||| || || || Sbjct 907242 ATCCAGAAGGAGTCCACTTTGCATTTGGTGCTCCGTCTCCGTGGAGG 907196 >seq5214 Length=3698012 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || ||||||||||| || | Sbjct 3522968 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCGTCG 3523027 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | || || || ||||||||||| || |||||||||||||| ||| Sbjct 3523028 GATACTATCGAAAATGTTAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 3523087 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| || || |||| || ||||| | |||||||| Sbjct 3523088 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 3523147 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| |||||| | || | || ||||||| || ||||| Sbjct 3523148 ATTCAGAAGGAGTCCACTTTGCACTTGGTGCTGCGTCTGCGTGGTGG 3523194 Score = 93.3 bits (102), Expect = 5e-14 Identities = 328/505 (65%), Gaps = 17/505 (3%) Strand=Plus/Plus Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966 ||| ||||| |||||||| || | ||| || | | | | |||| |||||||| ||||| Sbjct 3421118 GGATGCCAGGTTGCACACTGCAATCTCGTCCGGCGCGGAATACTCAACGATTTCGGTGCA 3421177 Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026 |||||| |||| || || || | || | |||||| ||| |||||| | || Sbjct 3421178 CAAATTGCTGCACTTGATGGTGCCAACATTCTGCTGGTTGCTCTTCCTGTTGCACGAATC 3421237 Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086 |||| | ||||||||| | ||||| || ||||| |||| | ||||||| ||| | Sbjct 3421238 CTTGAACAGCATGTACGGATTGCCGGTTTCCACCTGCGACTCAATGATGGCGAACCACAA 3421297 Query 81087 CTCGCGCGCCTTGACC--ACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGC 81143 | ||||||||| | | || | ||| || | | || | | ||| ||| Sbjct 3421298 GGACTGTGCCTTGACCGTCCGGTTCGCA--CGGCCCTCCTGCTCGTATTGCGTGTACAGC 3421355 Query 81144 TTCGTCGAACTTGGCACCGTGAAGTTCAGTG-AGGTCTGGGCACTCGTTAGGGCACATCA 81202 || ||||||| | || | || ||| ||| | ||||| | || || ||||||| Sbjct 3421356 TT-TTCGAACTCATCGCCCCACACATC-GTGCAGGCCGGGGCATTTGTGCGGACACATCA 3421413 Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262 | |||||| || | ||| || ||||||||| || || |||||||||||| Sbjct 3421414 GCGACCAGTCCCCGTTGGCCTCGACGCGTTTCATGAAAAGATCGGGTATCCAGAGGGCGT 3421473 Query 81263 TGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGT 81322 ||| || |||||| ||| |||||| | || ||| | || || || | Sbjct 3421474 AGAAGAGATCGCGGGCGCGATTCTCCTCCTTGCCGGTGTTCTTCTTGAGTTCCAGGAACT 3421533 Query 81323 CCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA------TCGACCCCTTGCGAC 81376 | | | ||||| ||||| |||||||| || | ||||| | || |||| | Sbjct 3421534 CGAACACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCGAAGGCACCGGGCCGCTTG---C 3421590 Query 81377 GGCCACCCTGGTTGACGTAACGGGC 81401 ||||||||| | |||||||| || Sbjct 3421591 CGCCACCCTGATCCACGTAACGTGC 3421615 >seq5242 Length=5320397 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/124 (76%), Gaps = 4/124 (3%) Strand=Plus/Minus Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCA--TTCTGTTCTATTTTCTGGC 64783 || |||||| ||||| || || ||||| | | | || ||| || |||||||||| Sbjct 3388122 GCATTTGCCGCCGTGGAGGGCATCTTCTT--CAGCGGCAGCTTCGCCTCCATTTTCTGGC 3388065 Query 64784 TAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACG 64843 | || ||||| || |||||||| || ||| | || || |||||||||||||| || |||| Sbjct 3388064 TGAAGAAGCGCGGTCTGATGCCGGGACTGACCTTCTCCAACGAGCTGATCTCCCGCGACG 3388005 Query 64844 AGGG 64847 |||| Sbjct 3388004 AGGG 3388001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570271697310480