Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_028659.1
Length=142987
Score E
Sequences producing significant alignments: (Bits) Value
seq5078 86.0 6e-12
seq4086 86.0 6e-12
seq4085 86.0 6e-12
>seq5078
Length=1488007
Score = 86.0 bits (94), Expect = 6e-12
Identities = 66/77 (86%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 64617 TGGTGCTCGCAGTAGGACTTGAACCCACGACCTTCTCCTTACAAGGGAGTTGCTCTACCA 64676
|||||| | |||||||| ||||||||||||||| | ||||||||| |||||||||||
Sbjct 1444826 TGGTGCCCCCAGTAGGATTTGAACCCACGACCTACCGCTTACAAGGCGGTTGCTCTACC- 1444884
Query 64677 ACTGAGCTATACGAGCA 64693
||||||||||| | |||
Sbjct 1444885 ACTGAGCTATAAGGGCA 1444901
>seq4086
Length=80244
Score = 86.0 bits (94), Expect = 6e-12
Identities = 66/77 (86%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 64617 TGGTGCTCGCAGTAGGACTTGAACCCACGACCTTCTCCTTACAAGGGAGTTGCTCTACCA 64676
|||||| | |||||||| ||||||||||||||| | ||||||||| |||||||||||
Sbjct 24745 TGGTGCCCCCAGTAGGATTTGAACCCACGACCTACCGCTTACAAGGCGGTTGCTCTACC- 24803
Query 64677 ACTGAGCTATACGAGCA 64693
||||||||||| | |||
Sbjct 24804 ACTGAGCTATAAGGGCA 24820
>seq4085
Length=47143
Score = 86.0 bits (94), Expect = 6e-12
Identities = 66/77 (86%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 64617 TGGTGCTCGCAGTAGGACTTGAACCCACGACCTTCTCCTTACAAGGGAGTTGCTCTACCA 64676
|||||| | |||||||| ||||||||||||||| | ||||||||| |||||||||||
Sbjct 41203 TGGTGCCCCCAGTAGGATTTGAACCCACGACCTACCGCTTACAAGGCGGTTGCTCTACC- 41261
Query 64677 ACTGAGCTATACGAGCA 64693
||||||||||| | |||
Sbjct 41262 ACTGAGCTATAAGGGCA 41278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 457399357629480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |