Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_028667.1 Length=39593 Score E Sequences producing significant alignments: (Bits) Value seq5077 82.4 2e-11 >seq5077 Length=233700 Score = 82.4 bits (90), Expect = 2e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 16406 TGCGCGGCCTGCAGGGCGACGTGGTGATCGACGAGGCGGCGTTCCACGAGTCCCTGGAGG 16465 ||||||| ||||||| ||| | || || || || || ||||| || ||||| | Sbjct 118127 TGCGCGGTATGCAGGGATTGGTGATTATTGATGAAGCCGCCTTCCATGATGATCTGGAAG 118186 Query 16466 AACTGCTGAAGGCCGCCCTGGCGCTGACGATGTGGGGTAACAAGGTCCGCCTGATCAGCA 16525 |||| ||||| || || |||||| || ||||||||| |||||| | | ||||||| Sbjct 118187 AACTTCTGAAAGCTGCTCTGGCGTTGCTGATGTGGGGCGGCAAGGTGCTTGTTATCAGCA 118246 Query 16526 CCCACAACGGCGTCGACAACCCGTT 16550 |||| || |||| | |||||||| Sbjct 118247 CCCATAATGGCGACACGAACCCGTT 118271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126567839724390