Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_028677.1
Length=46596
Score E
Sequences producing significant alignments: (Bits) Value
seq5078 84.2 7e-12
seq4577 84.2 7e-12
>seq5078
Length=1488007
Score = 84.2 bits (92), Expect = 7e-12
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 1708 GTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 1767
||||||||||||| |||||| |||||||||||| |||| ||||| ||||||||| |||||
Sbjct 1231647 GTAGCTCAATTGGCTAGAGCGCCGGTCTCCAAAACCGGAGGTTGTGGGTTCGAGACCCTC 1231706
Query 1768 CGGGCCTGC 1776
| |||||
Sbjct 1231707 CACCCCTGC 1231715
>seq4577
Length=60529
Score = 84.2 bits (92), Expect = 7e-12
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 1708 GTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 1767
||||||||||||| |||||| |||||||||||| |||| ||||| ||||||||| |||||
Sbjct 36419 GTAGCTCAATTGGCTAGAGCGCCGGTCTCCAAAACCGGAGGTTGTGGGTTCGAGACCCTC 36360
Query 1768 CGGGCCTGC 1776
| |||||
Sbjct 36359 CACCCCTGC 36351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148975994991484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |