Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_028677.1 Length=46596 Score E Sequences producing significant alignments: (Bits) Value seq5078 84.2 7e-12 seq4577 84.2 7e-12 >seq5078 Length=1488007 Score = 84.2 bits (92), Expect = 7e-12 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1708 GTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 1767 ||||||||||||| |||||| |||||||||||| |||| ||||| ||||||||| ||||| Sbjct 1231647 GTAGCTCAATTGGCTAGAGCGCCGGTCTCCAAAACCGGAGGTTGTGGGTTCGAGACCCTC 1231706 Query 1768 CGGGCCTGC 1776 | ||||| Sbjct 1231707 CACCCCTGC 1231715 >seq4577 Length=60529 Score = 84.2 bits (92), Expect = 7e-12 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1708 GTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 1767 ||||||||||||| |||||| |||||||||||| |||| ||||| ||||||||| ||||| Sbjct 36419 GTAGCTCAATTGGCTAGAGCGCCGGTCTCCAAAACCGGAGGTTGTGGGTTCGAGACCCTC 36360 Query 1768 CGGGCCTGC 1776 | ||||| Sbjct 36359 CACCCCTGC 36351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148975994991484