Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_029046.1
Length=50827
Score E
Sequences producing significant alignments: (Bits) Value
seq5079 86.0 2e-12
seq4704 86.0 2e-12
seq4161 82.4 2e-11
>seq5079
Length=1084440
Score = 86.0 bits (94), Expect = 2e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209
||| || |||||||||||||||||| ||||||||||| ||| ||||||||| ||||
Sbjct 806935 CGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAATC 806994
Query 21210 CTGTCTCCGCAACCAGT 21226
||| | |||||||||||
Sbjct 806995 CTGCCCCCGCAACCAGT 807011
Score = 82.4 bits (90), Expect = 2e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209
||| || |||||||||||||||||| ||||||||||| ||| ||||||||| ||||
Sbjct 1002478 CGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAATC 1002537
Query 21210 CTGTCTCCGCAACCA 21224
||| | |||||||||
Sbjct 1002538 CTGCCCCCGCAACCA 1002552
>seq4704
Length=42152
Score = 86.0 bits (94), Expect = 2e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209
||| || |||||||||||||||||| ||||||||||| ||| ||||||||| ||||
Sbjct 40100 CGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAATC 40041
Query 21210 CTGTCTCCGCAACCAGT 21226
||| | |||||||||||
Sbjct 40040 CTGCCCCCGCAACCAGT 40024
>seq4161
Length=32127
Score = 82.4 bits (90), Expect = 2e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209
||| || |||||||||||||||||| ||||||||||| ||| ||||||||| ||||
Sbjct 31863 CGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAATC 31804
Query 21210 CTGTCTCCGCAACCA 21224
||| | |||||||||
Sbjct 31803 CTGCCCCCGCAACCA 31789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162514322127722
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |