Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq5078 86.0 1e-11 seq4424 86.0 1e-11 >seq5078 Length=1488007 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2710 TGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCG 2769 |||||||||| |||||||| |||| ||||||||| |||||||||||||||||| |||| Sbjct 1125981 TGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 1126040 Query 2770 TCAGTCCTGCCA 2781 ||| || |||| Sbjct 1126041 TCACTCGCGCCA 1126052 >seq4424 Length=98381 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2710 TGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCG 2769 |||||||||| |||||||| |||| ||||||||| |||||||||||||||||| |||| Sbjct 55363 TGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 55304 Query 2770 TCAGTCCTGCCA 2781 ||| || |||| Sbjct 55303 TCACTCGCGCCA 55292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788266502634000