Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq5080 95.1 1e-14 seq5079 89.7 5e-13 >seq5080 Length=249237 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 66399 AAAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCT 66458 |||||||| | |||| | ||||||||||| | |||| || ||||||||||| |||||||| Sbjct 80079 AAAATGGCGCGCCCTGCTGGATTCGAACCAGCGACCCACAGCTTAGAAGGCTGTTGCTCT 80020 Query 66459 ATCCAGCTGAGCTAAGAGTGCATTA 66483 ||||| |||||||||| | || ||| Sbjct 80019 ATCCAACTGAGCTAAGGGCGCTTTA 79995 >seq5079 Length=1084440 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 66393 TTAAATAAAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGT 66452 || || | |||||| | |||| | ||||||||||| | |||| || ||||||||||| || Sbjct 782259 TTGAAAAGAATGGCGCGCCCTGCTGGATTCGAACCAGCGACCCACAGCTTAGAAGGCTGT 782318 Query 66453 TGCTCTATCCAGCTGAGCTAAG 66474 ||||||||||| |||||||||| Sbjct 782319 TGCTCTATCCAACTGAGCTAAG 782340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522079767957240