Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq5214 334 1e-86
>seq5214
Length=3698012
Score = 334 bits (370), Expect = 1e-86
Identities = 1197/1856 (64%), Gaps = 24/1856 (1%)
Strand=Plus/Plus
Query 75365 TTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATA 75424
|||||||||| ||||||||||| | | ||||| ||||| || |||||||||||
Sbjct 3420198 TTCTTATCCACGGTGAACTGAATCGCGTTCGCAGCTGGCTTTGTGCGCAGATAGTACATG 3420257
Query 75425 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTC 75484
|| || || || || |||| ||| || || ||| || |||||| || ||
Sbjct 3420258 CCGGTCTTGAGGCCAGCTTTCCAGGAGTAAAAGTGAATGGACGTCAGTTTGCCGTAGTTC 3420317
Query 75485 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 75544
|| || || | |||||| || | |||||||||||| |||||||| || || | ||| ||
Sbjct 3420318 GGCTCTGCCACATGAATGTTGAACGACTGACTTTGGTCGATGAACGCACCACGATCTGCG 3420377
Query 75545 GCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATA 75604
|||||||| || ||| ||| | |||||||| | || ||| ||| | || |
Sbjct 3420378 GCCATTTTAATTGTGGACTTCACGGAGATTTCCCACACGGTCTTGTAAAGAT-CGCGA-A 3420435
Query 75605 TCATCTGGAAGATTTG------TATTTTGAATGGATCCGCCATCAGATATAATTGTATTC 75658
| ||||| || | | | || || || || || | || || || |||
Sbjct 3420436 CCTTCTGG-GGAATGGCCTCAATGTTCTGGATTGAACCCCTGCTGGAAATGATCTGGTTC 3420494
Query 75659 TTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACA 75718
|| || || || | |||||| | ||||||||| | || | | |||| | || ||
Sbjct 3420495 TTCATATCGTCGTCCCACAAATCCAGCTCGGTTAAGTCCCTCAACAAATGATGGTTGACC 3420554
Query 75719 ATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACA 75778
| || ||||| || |||| || | || |||||||| ||| | || || || || | |
Sbjct 3420555 ACCTGGAATTCACCGGACAGAACGCGCCGGGTGTAAATGTTAGTTGTGTAGGGCTCGAAA 3420614
Query 75779 GATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAA 75838
||||| ||||| |||| ||||| ||||| || || || ||||| ||||| |||| |
Sbjct 3420615 GATTCGTTGTTGCCCATTATTTGGGCAGTGGATGCCGTGGGCATGGGTGCAACCAGCAGG 3420674
Query 75839 CTATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC 75897
|| |||| ||| || || | |||| || || || | | ||||||||| || ||
Sbjct 3420675 GAGTTCCTGACACCGTGCTGCT-TGATGGACTCCTTCAGTTTCTGCCAATCCCACAGGTC 3420733
Query 75898 TGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATT 75957
| || ||||| | ||||| || |||||||| ||||| | || |
Sbjct 3420734 CGTGGGCTTCTTGTCCCACATGTCGTACTGCAGAATTCCCTTGCTCACGGGGCTGCCCTC 3420793
Query 75958 ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTA 76017
|| ||||| || | || || | || || || || || || || || || |||||
Sbjct 3420794 GTAGGTTTCATAGGGACCTTCGACCTGCGCCAGCTCACAGCTGGCTTCCAAGGCGCCGTA 3420853
Query 76018 ATAAATTGTTTCGAAAATCTTCTTATT---AAGATCTTGCGCTTCAAGACTATCAAAAGG 76074
||||| |||||||| |||| || ||| |||| | ||||| || || | ||
Sbjct 3420854 GTAAATGGTTTCGAATATCTGCTGATTCAAAAGACC---GGCTTCCTCGCTTTCGTATGG 3420910
Query 76075 ATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATG 76134
| | | ||||| | || || || | ||||| || || || || | || | |||
Sbjct 3420911 GAATCGCATGAGAATCAGGGCGTCAGCGAAACCCTGGACACCGATGCCCACCGGACGATG 3420970
Query 76135 TCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATT 76194
||| ||| || | | | ||||| | || ||| | || || || || || || ||
Sbjct 3420971 CCTCAAATTAGATTTCTTTGTCTCTGGCAGGGGATAAAAGTTGATGTCAATTATCTTGTT 3421030
Query 76195 GAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA--TTTTC-C 76251
|||||||||| ||| || || ||||| ||||| |||||| | | ||| |
Sbjct 3421031 GAGATTTCTGGTAACCGTCTTGGTGACTTCCTTCAGTTTTTTGAAATCATACGTCTTCTC 3421090
Query 76252 ATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGC 76311
| || ||||| || || || || ||||| || || || || || | ||| | |
Sbjct 3421091 GGGCGTGACGAACATGTTGAGGGCAATGGATGCCAGGTTGCACACTGCAATCTCGTCCGG 3421150
Query 76312 ATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTG 76371
|| ||| | | || || ||||| | ||| || |||||||| || |||| ||| ||
Sbjct 3421151 CGCGGAATACTCAACGATTTCGGTGCACAAATTGCTGCACTTGATGGTGCCAACATTCTG 3421210
Query 76372 TTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAAT 76431
||||||||||| |||| || || ||||| | || | ||||| | || ||||| |
Sbjct 3421211 CTGGTTGCTCTTCCTGTTGCACGAATCCTTGAACAGCATGTACGGATTGCCGGTTTCCAC 3421270
Query 76432 CTGTGATTCGATAATAGATTTCCA-GACGACTCTAGCTTTTATTAT-AGATTTGTATCGC 76489
||| || || || || | ||| | |||| | || || | | | || | | ||
Sbjct 3421271 CTGCGACTCAATGATGGCGAACCACAAGGACTGT-GCCTTGACCGTCCGGTTCGCA-CGG 3421328
Query 76490 TTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAA 76549
||| || ||||| || || | | ||| || ||||| ||||| ||||| | ||
Sbjct 3421329 CCCTCCTGCTCGTATTGCGTGTACAGCTTTTCGAACTCATCGCCCCACACATCGTGCAGG 3421388
Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609
|| || |||| | ||||||||||| ||||| || || | ||| || ||||||||
Sbjct 3421389 CCGGGGCATTTGTGCGGACACATCAGCGACCAGTCCCCGTTGGCCTCGACGCGTTTCATG 3421448
Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669
|| ||||| |||||||| || || || ||||| |||| | | || || || ||
Sbjct 3421449 AAAAGATCGGGTATCCAGAGGGCGTAGAAGAGATCGCGGGCGCGATTCTCCTCCTTGCCG 3421508
Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729
|| ||||| || || || |||||||| | | || || ||||| || || || || ||
Sbjct 3421509 GTGTTCTTCTTGAGTTCCAGGAACTCGAACACGTCCGAGTGCCAGGGCTCCAGGTAAATG 3421568
Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789
|| | |||| || || || || |||||||| | || | || || || |
Sbjct 3421569 GCGAAGGCACCGGGCCGCTTGCCGCCACCCTGATCCACGTAACGTGCCACATTGTTGAAG 3421628
Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849
|| || | ||| || | | ||| || || || ||||| || || | || | | ||
Sbjct 3421629 ACCCTGAGCATGGGTACCAGGCCATTGGAGGTGCCATTCGTGCCGCAGATGGAGGTGCCC 3421688
Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909
|| || || | | | || || || ||||||||| ||| ||||| | ||
Sbjct 3421689 TTGGCCCGGATGCAATGGACATTCAGTCCAATGCCTCCTGCCGATTTCGAGATCATGGCG 3421748
Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969
|| ||| || | | |||||||||| || || || ||||| | || || ||
Sbjct 3421749 CACTGTTCCACCGACTTGAAGATGCCCTCGATCGAGTCGGCCGTCATGGTCAGCAGGAAG 3421808
Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029
|| |||| ||| | || || |||| ||| | || || || || || |||
Sbjct 3421809 CACGACGACAGTTGCGGCCGATTTGTGGCTGCGGCAAAAAGCGTTGGCGAGGCGTGGGTG 3421868
Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGA 77089
|| | || || || || ||||| || || | | || || || ||| | |||
Sbjct 3421869 AAGAACCGCTCCGACAGCAGGTTGTAGGTCTCCACGGCCGCATCGATGTCCTCTCCATGG 3421928
Query 77090 ATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATT 77149
||||| | || || ||||||| ||| ||||| || || || | |||| ||| |
Sbjct 3421929 ATTCCGATCGCCACGCGCATCAGCATGTGCTGCGGACGCTCGGCGATCTTTCCGTTTCTC 3421988
Query 77150 TTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 77205
|||| || ||| || ||| | |||||||||||||| |||||||| ||||||
Sbjct 3421989 TTCAGCAGGTACGAACGTTCGAGGGTTTTAAAACCAAAGTAGTTGTACCCAAAGTC 3422044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712886018489280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |