Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_031274.1 Length=50509 Score E Sequences producing significant alignments: (Bits) Value seq5079 82.4 2e-11 seq5080 80.6 9e-11 >seq5079 Length=1084440 Score = 82.4 bits (90), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 45656 TTGAAAGG--TGGCGTTCCGTACAGGATTCGAACCTGTAACCCACAGCTTAGAAGGCTGT 45713 |||||| | ||||| || | | ||||||||||| | ||||||||||||||||||||| Sbjct 782259 TTGAAAAGAATGGCGCGCCCTGCTGGATTCGAACCAGCGACCCACAGCTTAGAAGGCTGT 782318 Query 45714 AGCTCTATCCTATTGAGCTAACGG 45737 ||||||||| | |||||||| || Sbjct 782319 TGCTCTATCCAACTGAGCTAAGGG 782342 >seq5080 Length=249237 Score = 80.6 bits (88), Expect = 9e-11 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 45664 TGGCGTTCCGTACAGGATTCGAACCTGTAACCCACAGCTTAGAAGGCTGTAGCTCTATCC 45723 ||||| || | | ||||||||||| | ||||||||||||||||||||| ||||||||| Sbjct 80075 TGGCGCGCCCTGCTGGATTCGAACCAGCGACCCACAGCTTAGAAGGCTGTTGCTCTATCC 80016 Query 45724 TATTGAGCTAACGG 45737 | |||||||| || Sbjct 80015 AACTGAGCTAAGGG 80002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161496787731758