Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq4241 109 7e-19 seq5080 91.5 2e-13 >seq4241 Length=507456 Score = 109 bits (120), Expect = 7e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165488 GGGAGATTAGCTCAGCGGTAGAGCACCTCGTTTACACCGAGATTGTCGGGGGTTCGATCC 165547 ||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 464632 GGGCGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGTCGGGGGTTCGATCC 464691 Query 165548 CCTCATCTCCCAC 165560 ||||||| ||||| Sbjct 464692 CCTCATCGCCCAC 464704 >seq5080 Length=249237 Score = 91.5 bits (100), Expect = 2e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 165493 ATTAGCTCAGCGGTAGAGCACCTCGTTTACACCGAGATTGTCGGGGGTTCGATCCCCTCA 165552 ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||| Sbjct 211014 ATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGTCGGCGGTTCGATCCCGTCA 211073 Query 165553 TCTCCCAC 165560 | ||||| Sbjct 211074 TTGCCCAC 211081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592158211936080