Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq5122 136 8e-27 >seq5122 Length=22589142 Score = 136 bits (150), Expect = 8e-27 Identities = 296/438 (68%), Gaps = 5/438 (1%) Strand=Plus/Plus Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980 |||||||| || || || || |||||||| || || || ||||||||||||||| | Sbjct 17925536 GCCTTTGCCGCCGTGGAGGGCATCTTCTTCAGCGGCAGCTTTGCATCCATTTTCTGGCTT 17925595 Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040 ||||| | ||| | ||||||| || |||| |||||| ||| | || ||| | ||||| Sbjct 17925596 AAGAAGCGCGGTCTAATGCCTGGACTGACCTTCTCCAACGAGCTTATCTCTCGCGACGAG 17925655 Query 102041 GGTCTTCATCGCGACTTTG-CATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATC 102099 || | || ||||||||| | ||| || |||| | | | || | |||| | | Sbjct 17925656 GGCTTGCACTGCGACTTTGCCGTGC-TGATGTTCCAGCA-CCTGGTGCAGCGACCCAAGC 17925713 Query 102100 AAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCAC 102159 | ||| | || | || || || ||| || || ||||| || || || ||||| Sbjct 17925714 ACGAG--CGCATCATCGAGATCATCCGTGACGCGGTGGCGATTGAGCAGGAGTTCCTCAC 17925771 Query 102160 AGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGA 102219 | | ||||||| ||||| ||| | || ||||| || | ||||| ||||||||| || Sbjct 17925772 CGATGCCCTGCCCGTTAATTTAATCGGCATGAATTGTGACCTGATGTCCCAGTACATAGA 17925831 Query 102220 ATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACCAA 102279 || || || || | | || || |||| | | ||| ||| || | || Sbjct 17925832 GTTCGTTGCGGACCGTTTGCTTGTGGAGTTGGGCGTTGGGAAGATCTACAACACCAAGAA 17925891 Query 102280 CCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAG 102339 ||||||| |||||||| | || || || || ||||||||||||||||| |||| Sbjct 17925892 CCCCTTCAACTTCATGGAGATGATCTCGCTGGATGGAAAGACCAACTTTTTTGAGAAGAA 17925951 Query 102340 AGTCGCCGAGTATCAACG 102357 || || ||||| || || Sbjct 17925952 GGTGGCAGAGTACCAGCG 17925969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989519032573420