Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5124 138 1e-27 >seq5124 Length=26641161 Score = 138 bits (152), Expect = 1e-27 Identities = 516/804 (64%), Gaps = 9/804 (1%) Strand=Plus/Plus Query 36823 TTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATA 36882 ||||| | || ||| |||||||| ||||| || || | |||| |||||| || || Sbjct 10932399 TTTGTGCGCAGATAGTACATTCCGGTTTTAAGACCAGCTTTCCAGGAGTAAAAGTGTATG 10932458 Query 36883 CTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCT 36942 |||||||||| | || | || | | | || || | | || ||||| |||||| Sbjct 10932459 GAGGTCAGTTTTCCATAGTTGGGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCT 10932518 Query 36943 ATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACC 37002 || |||||||| | |||||| ||||||| | | | || || || ||||| ||| Sbjct 10932519 ATGAACGCACCACGGTCGGCGGCCATTTTAATCGTGGACTTAACTGAGATTTCCCACACC 10932578 Query 37003 GTTTTATATATTTGTTTTATATTATCTGGTAAAT---CTAAATGTT--GAATAGAACCAT 37057 || || || | | | | |||| || || |||||| | || || || Sbjct 10932579 GTCTTGTACAGATCGCGAACCCT--CTGGGGGATGGCCTCAATGTTTTGGATTGAGCCCC 10932636 Query 37058 TATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACT-TATTAGTTCT 37116 | | | || ||||| ||||| | | ||||| | | | || | |||| || Sbjct 10932637 TGCTGGATATGATCTGGTTCTTCATGTCGTCGTCCCACA-AGTCCAGCTCTGTTAGGTCG 10932695 Query 37117 CTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATA 37176 | ||| | || | || || |||||||| || || || | |||| || || ||||| Sbjct 10932696 CGCAACAAATGATGGTTGACCACCTGAAACTCGCCGGACAGAACTCGCCTGGTGTATATG 10932755 Query 37177 TTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTA 37236 || | ||||| || || | ||| ||||| || | | |||||||| |||||||||||| Sbjct 10932756 TTCGTGGTATAGGGCTCGAAGGATTCATTGTTGCCCATTATTTGAGCTGTAGATGCAGTG 10932815 Query 37237 GGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGT 37296 |||||||| || | || ||| || | | || || | || || || || ||| Sbjct 10932816 GGCATTGGAGCAACCAGCAGGGAGTTGCGGACACCGTGCTTCTTGATGGACTCCTTCAGT 10932875 Query 37297 TCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCT 37356 | | ||| ||||| | | |||||| ||| |||||| || || || | ||| || Sbjct 10932876 TTCTGCCAGTCCCAAAGGTTCGTTGGGACCTTGTCCCACATGTCGTACTGCAAAATTCCC 10932935 Query 37357 TTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAA 37416 || ||| | || | | ||| || || ||||| || | | | || ||||| || Sbjct 10932936 TTGCTCACCGGGCTGCCCTCATAGGTTTCGTAAGGGCCTTCGGTCTGGGCCAGTTCACAG 10932995 Query 37417 CTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCT 37476 || | ||| | || |||| || || |||||||| || || ||| || | ||| Sbjct 10932996 CTGGCTTCCAAGGCTCCATAGTAAATGGTTTCGAATATCTGCTGATTCAACAGACCGGCT 10933055 Query 37477 TCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCG 37536 ||||| || || | | | | || | || || | ||||| || ||||||| ||| Sbjct 10933056 TCTTCACTTTCATACGGGAATCGCATGAGAATCAAGGCGTCAGCGAATCCCTGAATACCT 10933115 Query 37537 ATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTG 37596 || || | ||| | || || ||| || | | ||| || |||||||| ||| Sbjct 10933116 ATGCCCACGGGACGGTGCCTCAAATTTGACTTCCTTGCCTCTGGCAAGGGATAATAGTTG 10933175 Query 37597 ATATCTATTATTTTATTTAGATTT 37620 ||||| ||||| || ||||||||| Sbjct 10933176 ATATCAATTATCTTGTTTAGATTT 10933199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468494790986560