Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq5124 363 2e-95 >seq5124 Length=26641161 Score = 363 bits (402), Expect = 2e-95 Identities = 1207/1869 (65%), Gaps = 24/1869 (1%) Strand=Plus/Plus Query 64829 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 64888 ||||| || ||||| ||||||| | | || || || || || |||||||||||||| Sbjct 10932362 CTTGTTCACGGTGAACTGAATGGCATTCGCAGCTGGCTTTGTGCGCAGATAGTACATTCC 10932421 Query 64889 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 64948 ||||| ||||| |||| |||||| || || || ||||| ||| | || Sbjct 10932422 GGTTTTAAGACCAGCTTTCCAGGAGTAAAAGTGTATGGAGGTCAGTTTTCCATAGTTGGG 10932481 Query 64949 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 65008 ||||| | ||| || || | || ||||| ||||| ||||| || || | ||| || || Sbjct 10932482 CTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCACCACGGTCGGCGGC 10932541 Query 65009 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 65067 |||||| || | | ||| || |||||||| | || || || | |||| | | Sbjct 10932542 CATTTTAATCGTGGACTTAACTGAGATTTCCCACACCGTCTTGTACAGATCGCGAACCCT 10932601 Query 65068 CTTCTGGAAGGTTTGTAT--TCTGAATGGATCCACCATCTGCC-ATAATCCTATTCTTGA 65124 || ||| || | || | || || || || || ||| || ||| ||||| | Sbjct 10932602 CTGGGGGATGGCCTCAATGTTTTGGATTGAGCC-CCTGCTGGATATGATCTGGTTCTTCA 10932660 Query 65125 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 65184 | || || | ||| || | ||| |||| | | | | ||| | || || || | Sbjct 10932661 TGTCGTCGTCCCACAAGTCCAGCTCTGTTAGGTCGCGCAACAAATGATGGTTGACCACCT 10932720 Query 65185 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 65244 |||| || || |||| |||| || ||||| || || ||||||| || || | || | Sbjct 10932721 GAAACTCGCCGGACAGAACTCGCCTGGTGTATATGTTCGTGGTATAGGGCTCGAAGGATT 10932780 Query 65245 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 65304 |||| || |||| |||||||| || |||||||| ||||| || || |||| | | Sbjct 10932781 CATTGTTGCCCATTATTTGAGCTGTAGATGCAGTGGGCATTGGAGCAACCAGCAGGGAGT 10932840 Query 65305 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 65364 | | | ||||| | |||| || || || | ||| | |||||| | || | Sbjct 10932841 TGCGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTCGTTG 10932900 Query 65365 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATAT 65423 | || || | ||| || || || | | | ||| |||| Sbjct 10932901 GGACCTTGTCCCACATGTCGTACTGCAAAATTCCCTTGCTCACCGGGCTGCCCT-CATAG 10932959 Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483 || ||||| || ||||| ||| || |||||||| || || || || || || || ||| Sbjct 10932960 GTTTCGTAAGGGCCTTCGGTCTGGGCCAGTTCACAGCTGGCTTCCAAGGCTCCATAGTAA 10933019 Query 65484 ATGGTTTCGAAGATCTTCTTATTTA---GATCTTGTGCTTCCAGGCTATCAAATGGATAA 65540 ||||||||||| |||| || ||| | || | | |||| || ||| | || | Sbjct 10933020 ATGGTTTCGAATATCTGCTGATTCAACAGACCGGCTTCTTCA---CTTTCATACGGGAAT 10933076 Query 65541 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 65600 | |||||| || ||||| || ||||| |||| ||| || || | || | || ||| Sbjct 10933077 CGCATGAGAATCAAGGCGTCAGCGAATCCCTGAATACCTATGCCCACGGGACGGTGCCTC 10933136 Query 65601 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 65660 ||| || | || ||||| | |||||||| || ||||| || || || || ||| Sbjct 10933137 AAATTTGACTTCCTTGCCTCTGGCAAGGGATAATAGTTGATATCAATTATCTTGTTTAGA 10933196 Query 65661 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATC---T 65717 |||||| || || ||| || ||||| || || |||||| | || || | Sbjct 10933197 TTTCTGGTAACTATCTTGGTGACTTCCTTGAGCTTCTTGAAATCATACGTCTTCTCCGGT 10933256 Query 65718 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 65777 | ||||||||||| | |||| ||||||| || || || |||| ||||| | | Sbjct 10933257 GTGACAAACATGTTGAGGGCAATGGATGCCAAGTTGCAGACAGCTATCTCATCCGGCGCG 10933316 Query 65778 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 65837 | |||| | || || ||||| | || || ||||||||||| || | ||| || || Sbjct 10933317 GAGTATTCAACGATTTCCGTGCACAAGTTGCTGCACTTGATGGTGCCAACATTCTGCTGG 10933376 Query 65838 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 65897 || ||||| |||| || || ||||| | || ||| | ||| | |||||||| | || Sbjct 10933377 TTGCTCTTCCTGTTGCAAGCGTCCTTGAAGAGCATGTACGGATTTCCAGTTTCCACTTGC 10933436 Query 65898 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCT 65957 | || || || || | ||| | | | ||||||| | | ||| ||| || Sbjct 10933437 GCCTCAATGATGGCATACCACAGGGATTGAGCCTTAACCGTTCGGTTG--GCTCGACCCT 10933494 Query 65958 CTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAG 66015 ||| |||||| ||||| |||||| || || ||||| |||| | | |||| Sbjct 10933495 CTTGCTCGTATTTCTCATACAGCTTTTCGAATTCATCGCCCCACACATCTTGGAGGCCAG 10933554 Query 66016 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 66075 | |||| | || ||||| | |||||| || |||| ||| ||| || ||||| |||| Sbjct 10933555 GGCATTTGTGGGGGCACATGAGCGACCAATCACCGTTGGCCTCCACGCGCTTCATGAAGA 10933614 Query 66076 GATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 66135 |||| || ||||| ||||| ||| | ||| | || | || || || || || || | Sbjct 10933615 GATCGGGTATCCACAGAGCGTAAAACAGATCGCGGGCGCGATTCTCTTCCTTGCCCGTGT 10933674 Query 66136 TCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCA 66195 | || || || ||||||||| | | | ||| | ||||| || |||| ||| ||||| | Sbjct 10933675 TTTTCTTTAGTTCGAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAA 10933734 Query 66196 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 66255 | || || || ||| |||||||| || | || | || || || | || | Sbjct 10933735 AGGCACCGGGACGCTTGCCGCCTCCCTGGTCCACATAACGCGCCACATTGTTGAAGACCC 10933794 Query 66256 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTG 66315 | | ||| |||| | |||||||| || || || || ||| | || || | || ||| Sbjct 10933795 TGAGCATGGGAACCAACCCATTGGACGTTCCGTTTGTGCCGCAAATCGAGGTGCCCTTTG 10933854 Query 66316 CACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 66373 ||||||| | | | ||| || || || || || || || ||||| | ||||| Sbjct 10933855 CACGAATGCAATGCACGTTG--AGTCCAATGCCACCAGCAGACTTGGAGATCATGGCGCA 10933912 Query 66374 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 66433 | | | | | | | |||||||| || || | ||||| | || || ||||| Sbjct 10933913 CTGCTCCACAGACTTAAAAATGCCCTCGATTGAGTCGGCAGTCATGGTCAGAAGGAAACA 10933972 Query 66434 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 66493 |||| || | || | || | ||| ||| | || || || || |||||||| Sbjct 10933973 CGACGACAGCTGCGGGCGGTTTGTGGCAGCAGCAAACAGCGTGGGCGATGCATGCGTAAA 10934032 Query 66494 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 66553 | || || || |||||||| || || | || | ||||||||| | ||| || Sbjct 10934033 GTAGCGCTCCGATAGAAGATTGTAGGTTTCCACGGCCGCATCTATATCCTCTCCATGGAT 10934092 Query 66554 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTT 66613 ||| | || || ||||| | ||| ||||| |||| || ||||||| |||| | || Sbjct 10934093 TCCGATCGCCACGCGCATCAGCATATGCTGCGGTCGCTCTGCGATCTTTCCGTTTGTCTT 10934152 Query 66614 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 66673 | | ||||| |||| ||| ||||| ||||||||||| || |||||| || || Sbjct 10934153 GAGGAGATAGGAACGCTCCAGAGTCTTAAAGCCAAAATAGTTATAGCCAAAGTCACGATC 10934212 Query 66674 GTAAATAAT 66682 || || || Sbjct 10934213 ATAGATTAT 10934221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658130644032160