Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq5124 226 2e-54 >seq5124 Length=26641161 Score = 226 bits (250), Expect = 2e-54 Identities = 483/715 (68%), Gaps = 11/715 (2%) Strand=Plus/Plus Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936 || |||||| ||||| || ||||| |||| | |||||| | ||| || || || Sbjct 3014252 ATGTTCAGCTTGGGAAAGGGTCGCGGTGTCCGCTTCAGCTGCTCCTTCAGCGGCTCGACA 3014311 Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCC 20996 ||||| ||| ||||| | ||| |||| |||||| |||||||| ||||| |||| || Sbjct 3014312 TGGTTCAGGTAGACGTGCGTGTCGCCCATGGTGTGGACAAAGTCGCCCGGCTTCAGACCT 3014371 Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 || || || ||||||| || || || ||||||||| |||||| || || || || || Sbjct 3014372 GTCACATGGGCGATCATGTAGGTGAGCAGGGCGTAGGAGGCGATATTGAAGGGTACGCCC 3014431 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCG---AGCCACG 21113 |||||||||||||| ||||||||| |||||||| || ||||| || || | ||| Sbjct 3014432 AGGCCCATGTCGGCACTCCTCTGGTAGAGCTGGCACGATAGCTCACCGCGCGTGGAGACG 3014491 Query 21114 TAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTC 21173 ||||||| || | |||||| || || || ||||| | | || | || ||| Sbjct 3014492 AAAAACTGTGCCAGACAGTGACACGGTGGCAGGACCATCTTTGGCATATCAACAGGATTC 3014551 Query 21174 CACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCACGTAA 21233 || || ||| | |||||||||||| ||| | || || || | ||| | Sbjct 3014552 CAAGCCGACAAGATGATGCGCCGATCTGAGGGATTATTCTTGATAGTGTCAATCACCCGA 3014611 Query 21234 CGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCA 21293 |||||||| || | |||| || ||||| | ||||| |||||||||||| Sbjct 3014612 CGCAGCTGATCGATTCCCTTGCCGCTGTAGTCGTCGTCGCAGGTGGCGTACTCCGCCCCG 3014671 Query 21294 AAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAG 21353 || |||| ||||||||| ||||| ||||| ||||||||||| || || ||| || Sbjct 3014672 AAGTGTCGCCACTGGAAGCCGTAGACCGGGCCCAGATCGCCAACGGAACGCTCCGTTAAC 3014731 Query 21354 CCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACG--CCGCGG 21410 ||| | || | ||| || | | | | || | ||||||| || | ||| | || Sbjct 3014732 CCCAG-GCTGTCCAGGAACTCTCTGCTGCTGTTCCCGTCCCAGATGTGCACGTTCTTCGC 3014790 Query 21411 C-GCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGAC 21469 | || || | ||| ||| || |||| | |||||||||| |||||| | || Sbjct 3014791 CTGCAGCAACT---TGGCGTCCGTCTTGCCCGCCACGAACCACAGCAGCTCCTCGGCTAC 3014847 Query 21470 GCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAACTCGTCCCTGAGGTTATATCG 21529 | | | ||||| | |||||||| | ||| ||||| |||| | |||| | || Sbjct 3014848 TGCGCGGAAGAACACACGCTTGGTGGTCAGCAGTGGAAAGGACTCCCGCATGTTAAAGCG 3014907 Query 21530 GGCCTGAAGCCCGAACACGGACCTGGTGCCCACGCCCGTCCTGTCCTCCCTCTGC 21584 |||| ||||||| |||| |||||||| |||| | |||| || |||| Sbjct 3014908 CATCTGACAACCGAACATGGACAGCGTGCCCACTTCCGTGCGGTCCATCCGCTGC 3014962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427749285923520