Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq5124 109 5e-19 >seq5124 Length=26641161 Score = 109 bits (120), Expect = 5e-19 Identities = 178/254 (70%), Gaps = 2/254 (1%) Strand=Plus/Plus Query 5239 TCCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACC-TCTT 5297 |||||| ||||||||||| | |||||||| |||||||| |||| || ||| || Sbjct 14434236 TCCGGTGGAACCGAATCCCGCCTCGCCGCGCTCGGTGTCCTCCAGCTTGTCCACCATCAC 14434295 Query 5298 GAACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAA 5357 | ||| || | | ||||| ||||| || | ||| || || | ||| || | ||| | Sbjct 14434296 CAGTTGC-GGATAGAAGATGCGCTCGCAAATGAACTGGGCGATGCGGTCGCCGTGCTTCA 14434354 Query 5358 CCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTT 5417 |||| || || || | || ||||| || || |||| |||||| || || || | Sbjct 14434355 CCTCGAAATCTACATTAGAGTGATTGAACAGGACGACGCCGAGATTGCCGCGATAATCCT 14434414 Query 5418 CGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTG 5477 |||| | || || |||||||| ||||| |||| || || || || ||||| || || | Sbjct 14434415 CGTCCACCACACCGGCGCCCACATCGATGAAGTTCTTCACGGCCAGCCCGGACCGAGGGG 14434474 Query 5478 CTATGCGTCCGTAG 5491 | | ||||||||| Sbjct 14434475 CCACCCGTCCGTAG 14434488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447721721586880