Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5124 154 1e-32 >seq5124 Length=26641161 Score = 154 bits (170), Expect = 1e-32 Identities = 321/472 (68%), Gaps = 16/472 (3%) Strand=Plus/Plus Query 25374 TTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCT 25433 ||||| |||| |||||||||||| || || || ||||| ||||||||| || Sbjct 3014249 TTTATGTTCAGCTTGGGAAAGGGTCGCGGTGTCCGCTTCAGCTGCTCCTTCAGCGGCTCG 3014308 Query 25434 ACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGC 25493 || || | |||||||||||| | ||| |||| ||||||||||| || ||||| | || Sbjct 3014309 ACATGGTTCAGGTAGACGTGCGTGTCGCCCATGGTGTGGACAAAGTCGCCCGGCTTCAGA 3014368 Query 25494 CCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACC 25553 || || || | || |||||||| ||||| || |||| |||||| || |||||||| Sbjct 3014369 CCTGTCACATGGGCGATCATGTAGGTGAGCAGGGCGTAGGAGGCGATATTGAAGGGTACG 3014428 Query 25554 CCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGC---- 25609 || | |||||||| | | ||||||||||||||| ||||| ||||| || ||| Sbjct 3014429 CCCAGGCCCATGTCGGCAC-TCCTCTGGTAGAGCTGGCACGATAGCTCACCG-CGCGTGG 3014486 Query 25610 TCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAG 25669 ||| ||||||| || || ||||| || || | || || || || Sbjct 3014487 AGACGAAAAACTGTGCCAGACAGTGACACGGTGGCAGGACCATCTTTGGCATATCAACAG 3014546 Query 25670 GGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATA----AGATCC 25725 | ||||| || ||| |||||||| || ||| || || | | ||||| ||| Sbjct 3014547 GATTCCAAGCCGACAAGATGATGCGCCGATCTGAGGGATTATTCTTGATAGTGTCAATCA 3014606 Query 25726 GCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TGCCCTCATGTCCGTGTA 25784 | | |||||||||| | ||| | || |||||| | | || || | ||| Sbjct 3014607 CCCG----ACGCAGCTGATCGATTCCCTTGCCGCTGTAGTCGTCGTCGCAGGT-GGCGTA 3014661 Query 25785 CTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCA 25836 ||| || ||||| | | ||||||||| ||||| ||||| || || || ||| Sbjct 3014662 CTCCGCCCCGAAGTGTCGCCACTGGAAGCCGTAGACCGGGCCCAGATCGCCA 3014713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340116358832052