Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_006548.1 Length=38439 Score E Sequences producing significant alignments: (Bits) Value seq3473 387 3e-103 >seq3473 Length=3319 Score = 387 bits (428), Expect = 3e-103 Identities = 979/1457 (67%), Gaps = 34/1457 (2%) Strand=Plus/Plus Query 32441 CCGGCCAGCCGTCGCCGCCGTTGCCGTTCGCGGCGCTGCAGGAGCGCATCTGGACTGTG- 32499 |||||||| ||||||||||| || || || || ||| |||| |||| ||||| || Sbjct 1 CCGGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAGGAACGCACTTGGACCGTCA 60 Query 32500 GCCGTGTCGACGGATGGACCGCCGGTAGTGGACGCGCGCATCGTCTGGCAACTGCAGGAC 32559 || || | ||||| || ||||| || || | ||||| ||||||||| || |||| | Sbjct 61 GCATTGGC-ACGGACGGCCCGCCCGTCGTCAATGCGCGGATCGTCTGGACGCTCCAGGGC 119 Query 32560 GAACAGCCGTTGATCTTAGTCATTACCGGAAACCGGATCACCGCGTGGCCGTTTGCGCCG 32619 || | | || || | ||||| ||||| || || |||| ||| ||| | || |||||| Sbjct 120 GAGCCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCCTGGACCTTCGCGCCG 179 Query 32620 GACTGGGCTGATGGCGTGCAGGAGTCACTGGAGTGGTT-GACCGAGCTGCTGACCAGCAC 32678 ||||||| || || | ||| ||| || | | ||| | | ||| ||| Sbjct 180 GACTGGGGCGACAGCATCGTCGAGCGCCTG-AGCGCCTCGACAAATATCCTGCAAAGCGA 238 Query 32679 GTCGGGAGTCGAGCAACGGCGATCGCTGCGCCTGTCACCCCGGCGTTCATTCGAAGCCGA 32738 || | || || || || | |||||||| | || || || |||||||| | Sbjct 239 ATCAGCCGTGACCCAGCGCCGGGCTATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAA 298 Query 32739 GTTCTACGCAGAGGGGCGCGAGCGCGTGCTCCTCGACCTCAGCCTTGCAGGCTGGGGCGG 32798 | ||||| | | |||||||| |||||| ||| | | || |||||||||| Sbjct 299 CATGTACGCGGTAGACCGCGAGCGGCAGCTCCTGGACATGACGCTGTTTGGCTGGGGCGC 358 Query 32799 GCGGATCTGGGCGCTGCCGGTGTGGCCGGACATCCAGCTGCTGGCAAGCGTCAC-CGCGG 32857 ||| || |||||||||||| | ||||| || ||||| ||||| |||| | | |||| Sbjct 359 GCGAATTTGGGCGCTGCCGATTTGGCCTGATATCCAACTGCT-CCAAGAACCGCTGGCGG 417 Query 32858 CCGGCGCAC-AAACGGTCGAGTGCGATACCCGCTGGCGGGATTTTCGTGCTGGGGGCCTT 32916 ||||| | | ||| || |||||| || | | | || || || | || || || Sbjct 418 CCGGCTCGCTGAACATTC-CGTGCGACACGGTCGGCCTCGACTTCCGCGACGGCGGTCTG 476 Query 32917 GCGCTGCTGCGCGGTGAGTCAGCGTTCGAATACGAGGTGGTCGAGATTCAGGATCTGACC 32976 ||| |||||||||| ||| || ||| || || || |||||| | ||| ||||| Sbjct 477 GCGATGCTGCGCGGCGAGGACGCCTTCACCTATGAAGTCGTCGAGGTCAAGGCAGTGACC 536 Query 32977 G-CGTCGGCGATTCAACTGGCGCGCCCGGTGCAGCGGCGCTGGCCGGCCGGCTCCCGCTT 33035 | || |||| | | |||| ||||| || ||| |||| | ||||| || | Sbjct 537 GCCGCCGGC-CTGGACCTGGTCCGCCCCGTCCAGGCCACCTGGGTAACTGGCTCGCGACT 595 Query 33036 GTACCCCATTCGCACCGCCCAGTTGACGGAACAACCGGCGCTGACCCGTCTGACCGACAC 33095 |||||| | |||||||| ||| |||| ||||| || |||||||||| |||||||| || Sbjct 596 GTACCCGGTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATAC 655 Query 33096 CCTCTACAGCGCGCAGGCGCGGTTCCTCGTGATGGACAGCAGCGATTGGCCGGAGGTCAT 33155 | | |||| || | |||||| | ||||| ||||| ||||| ||||| || Sbjct 656 CGCGCAGTCTGCGCGGGTGTCGTTCCTGATAATGGAGCCCAGCGCCTGGCCCGAGGTAAT 715 Query 33156 GCCCTCGACAACATACCGGGGCTGGCCGGTGCTCGGGCAGCGGCCCGAGGAGTCCGAAGA 33215 ||| |||| || ||| |||| |||| ||||| | |||||| || || || |||||| Sbjct 716 GCCGGCGACGACCTACAGGGGGCGGCCAGTGCTGGAGCAGCGCCCGGACGAAAGCGAAGA 775 Query 33216 CTTGTCCCTGTCGTACCAGCGGCTGCTCGATGTCCTGGATAACGAAACCGGGCTGCCGCA 33275 | | || || ||||| ||||| |||||| |||| | || | | || | Sbjct 776 CCTCACCTCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCG 835 Query 33276 ATTTGCCGACCAGGCGGGGGTTG-GCTTCCCGGTGCACGGCTTCCGTTGGCAGACCTCCG 33334 | ||||| || ||| | | ||| ||| || ||| || ||| | | Sbjct 836 CGTGACCGACGTCGCCGGGATGGCGCTGCCC-GTCATCGGTCATCGCTGGATCGGCATGG 894 Query 33335 GCCGCGAGGAGCATGCGGCGCTGCGCAGCCTGCTGTACGCCCTGCGTGGCCGGCAGAAAG 33394 |||| | |||| ||||| | ||||||||| | || || ||||| |||| |||||| Sbjct 895 GCCGAGCCGAGCGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTGCGAGGCCAGCAGAAGC 954 Query 33395 CGATCTGGATTCCGACCCATGCCGCCGACCTGGTGCTGGTCGACACAG--TGGCTGC-GA 33451 || | ||| | |||||||| |||| ||||||| || |||| ||| | | || || | Sbjct 955 CGCTATGGGTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGT 1014 Query 33452 CCAGCTCCGTCCTCGATGTCGAGCTGGTTGGGCT-GGCGCGGTTCTTCA--GGGCTGATG 33508 ||| || || || || || | || | |||| || || ||| || |||| || Sbjct 1015 CCA-CTGCG--CTGGACGT-GCGCAATATCGGCTATGCCCGTTTCGCCAATGGGC-GA-- 1067 Query 33509 CTCCCGGCCGGCGCGATATCCGCATTGAGCTGTTCGGCGGGCAGGTCTTCCACCGCCGCA 33568 || || || |||||||||||||| ||||||| || ||| |||| |||||||||| Sbjct 1068 --CCGGGTCGTCGCGATATCCGCATCGAGCTGTACGACGGCACCGTCTATCACCGCCGCA 1125 Query 33569 TCCTCGACGTCAGCGAGCTGAACGTCGACGTCGAGCGCTTGGCGATCGACAGCGCGCTGG 33628 | ||| | || ||||||| ||| |||| |||||||||||| |||||| ||| |||| Sbjct 1126 TTCTCACCAGCACCGAGCTGGACGCCGACACCGAGCGCTTGGCCATCGACGCCGCCCTGG 1185 Query 33629 GCACCGTTGTCCGGCCGAGCGACGTCGCACGCATCTCATTCATGACACTTTGCCGGCAGG 33688 || | | ||| ||||| ||| || || ||||||| |||||| | || || | | Sbjct 1186 GCCGCCTGGTCGAGCCGACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCG 1245 Query 33689 ACAGCGACAGCGTGCAGATCACCCACGAAACCGACACCGACGGCATCAGCACAGCCAGCA 33748 ||||||| || |||| |||| ||||| | ||| ||| || || ||| || Sbjct 1246 CCAGCGACGTGGTCGAGATTGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCC-GCG 1304 Query 33749 C-GGTGTTCCGAGGAGTACG---CGATGAGCTTCAGTGATCGCGAGCGGTCGGTCGCCGA 33804 | | ||| ||| || || ||||||| || | ||||| | ||| |||| || Sbjct 1305 CTGACATTCAAAGGGGTTCGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGA 1364 Query 33805 TGGCCAGGCGATTAGCTTGTACGACTTCCGCCTCGGCCCGATCCGCTGGACCTAC-ACAA 33863 ||| ||| || | | ||||| | ||| ||| ||| |||||||||||| |||| ||| Sbjct 1365 TGGGCAGCCGGTGCGGCTGTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAG 1424 Query 33864 CAGCGAATCGAGACATC 33880 ||||| | || |||||| Sbjct 1425 CAGCG-ACCGGGACATC 1440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122875722864488