Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq5124 347 2e-90 >seq5124 Length=26641161 Score = 347 bits (384), Expect = 2e-90 Identities = 1201/1867 (64%), Gaps = 20/1867 (1%) Strand=Plus/Plus Query 61985 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 62044 ||||| || ||||| ||||||| | | || || || || || |||||||||||||| Sbjct 10932362 CTTGTTCACGGTGAACTGAATGGCATTCGCAGCTGGCTTTGTGCGCAGATAGTACATTCC 10932421 Query 62045 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 62104 ||||| ||||| |||| |||||| || || || ||||| ||| | || Sbjct 10932422 GGTTTTAAGACCAGCTTTCCAGGAGTAAAAGTGTATGGAGGTCAGTTTTCCATAGTTGGG 10932481 Query 62105 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62164 ||||| | ||| || || | || ||||| ||||| ||||| || || | ||| || || Sbjct 10932482 CTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCACCACGGTCGGCGGC 10932541 Query 62165 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 62223 |||||| || | | ||| || |||||||| | || || || | |||| | | Sbjct 10932542 CATTTTAATCGTGGACTTAACTGAGATTTCCCACACCGTCTTGTACAGATCGCGAACCCT 10932601 Query 62224 CTTCTGGAAGGTTTGTAT--TCTGAATGGATCCACCATCTGCC-ATAATCCTATTCTTGA 62280 || ||| || | || | || || || || || ||| || ||| ||||| | Sbjct 10932602 CTGGGGGATGGCCTCAATGTTTTGGATTGAGCC-CCTGCTGGATATGATCTGGTTCTTCA 10932660 Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62340 | || || | ||| || | ||| |||| | | | | ||| | || || || | Sbjct 10932661 TGTCGTCGTCCCACAAGTCCAGCTCTGTTAGGTCGCGCAACAAATGATGGTTGACCACCT 10932720 Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400 |||| || || |||| |||| || ||||| || || ||||||| || || | || | Sbjct 10932721 GAAACTCGCCGGACAGAACTCGCCTGGTGTATATGTTCGTGGTATAGGGCTCGAAGGATT 10932780 Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62460 |||| || |||| |||||||| || |||||||| ||||| || || |||| | | Sbjct 10932781 CATTGTTGCCCATTATTTGAGCTGTAGATGCAGTGGGCATTGGAGCAACCAGCAGGGAGT 10932840 Query 62461 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 62520 | | | ||||| | |||| || || || | ||| | |||||| | || | Sbjct 10932841 TGCGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTCGTTG 10932900 Query 62521 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATAT 62579 | || || | ||| || || || | | | ||| |||| Sbjct 10932901 GGACCTTGTCCCACATGTCGTACTGCAAAATTCCCTTGCTCACCGGGCTGCCCT-CATAG 10932959 Query 62580 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 62639 || ||||| || ||||| ||| || |||||||| || || || || || || || ||| Sbjct 10932960 GTTTCGTAAGGGCCTTCGGTCTGGGCCAGTTCACAGCTGGCTTCCAAGGCTCCATAGTAA 10933019 Query 62640 ATGGTTTCGAAGATCTTCTTATTTA---GATCTTGTGCTTCCAGGCTATCAAATGGATAA 62696 ||||||||||| |||| || ||| | || | | |||| || ||| | || | Sbjct 10933020 ATGGTTTCGAATATCTGCTGATTCAACAGACCGGCTTCTTCA---CTTTCATACGGGAAT 10933076 Query 62697 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62756 | |||||| || ||||| || ||||| |||| ||| || || | || | || ||| Sbjct 10933077 CGCATGAGAATCAAGGCGTCAGCGAATCCCTGAATACCTATGCCCACGGGACGGTGCCTC 10933136 Query 62757 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62816 ||| || | || ||||| | |||||||| || ||||| || || || || ||| Sbjct 10933137 AAATTTGACTTCCTTGCCTCTGGCAAGGGATAATAGTTGATATCAATTATCTTGTTTAGA 10933196 Query 62817 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---T 62873 |||||| || || ||| || ||||| || || |||||| | | || | Sbjct 10933197 TTTCTGGTAACTATCTTGGTGACTTCCTTGAGCTTCTTGAAATCATACGTCTTCTCCGGT 10933256 Query 62874 ATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 62933 | ||||||||||| | ||||| ||||||| || || || |||| ||||| | | Sbjct 10933257 GTGACAAACATGTTGAGGGCAATGGATGCCAAGTTGCAGACAGCTATCTCATCCGGCGCG 10933316 Query 62934 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 62993 | |||| | || || ||||| | || || |||||||| || || | ||| || || Sbjct 10933317 GAGTATTCAACGATTTCCGTGCACAAGTTGCTGCACTTGATGGTGCCAACATTCTGCTGG 10933376 Query 62994 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63053 || ||||| |||| || || ||||| | || ||| | ||| | |||||||| | || Sbjct 10933377 TTGCTCTTCCTGTTGCAAGCGTCCTTGAAGAGCATGTACGGATTTCCAGTTTCCACTTGC 10933436 Query 63054 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCT 63113 | || || || || | ||| | | | ||||||| | | ||| || | ||| Sbjct 10933437 GCCTCAATGATGGCATACCACAGGGATTGAGCCTTAACCGTTCGGTTGGCTCGACCCTCT 10933496 Query 63114 CTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 63173 |||||| ||||| |||||| || || ||||| |||| | | ||||| Sbjct 10933497 TGCTCGTATTTCTCATACAGCTTTTCGAATTCATCGCCCCACACATCTTGGAGGCCAGGG 10933556 Query 63174 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63233 |||| | || ||||| | |||||| || |||| ||| ||| || ||||| |||||| Sbjct 10933557 CATTTGTGGGGGCACATGAGCGACCAATCACCGTTGGCCTCCACGCGCTTCATGAAGAGA 10933616 Query 63234 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTC 63293 || || ||||| ||||| ||| ||||| | || | || || || || || || || Sbjct 10933617 TCGGGTATCCACAGAGCGTAAAACAGATCGCGGGCGCGATTCTCTTCCTTGCCCGTGTTT 10933676 Query 63294 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 63353 || || || ||||||||| | | | ||| || ||||| || |||| ||| ||||| | Sbjct 10933677 TTCTTTAGTTCGAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAG 10933736 Query 63354 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63413 | || || || ||| |||||||| || | || | || || || | || || Sbjct 10933737 GCACCGGGACGCTTGCCGCCTCCCTGGTCCACATAACGCGCCACATTGTTGAAGACCCTG 10933796 Query 63414 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCA 63473 | ||| |||| | || || || | || || || ||| | || || | || | ||| Sbjct 10933797 AGCATGGGAACCAACCCATTGGACGTTCCGTTTGTGCCGCAAATCGAGGTGCCCTTTGCA 10933856 Query 63474 CGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 63531 ||||| | | | ||| || || || || || || || ||||| | ||||| Sbjct 10933857 CGAATGCAATGCACGTTG--AGTCCAATGCCACCAGCAGACTTGGAGATCATGGCGCACT 10933914 Query 63532 GTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGC 63591 | | | | | | | || ||||| || || | ||||| | || || ||||| Sbjct 10933915 GCTCCACAGACTTAAAAATGCCCTCGATTGAGTCGGCAGTCATGGTCAGAAGGAAACACG 10933974 Query 63592 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 63651 |||| || | || | || | ||| ||| | || || || || |||||||| Sbjct 10933975 ACGACAGCTGCGGGCGGTTTGTGGCAGCAGCAAACAGCGTGGGCGATGCATGCGTAAAGT 10934034 Query 63652 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTC 63711 | || || || |||||||| || || | || | ||||||||| | ||| |||| Sbjct 10934035 AGCGCTCCGATAGAAGATTGTAGGTTTCCACGGCCGCATCTATATCCTCTCCATGGATTC 10934094 Query 63712 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 63771 | | || || ||||| | ||| ||||| |||| || ||||||| |||| | || | Sbjct 10934095 CGATCGCCACGCGCATCAGCATATGCTGCGGTCGCTCTGCGATCTTTCCGTTTGTCTTGA 10934154 Query 63772 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63831 | ||||| |||| ||| ||||| ||||||||||| || |||||| || || | Sbjct 10934155 GGAGATAGGAACGCTCCAGAGTCTTAAAGCCAAAATAGTTATAGCCAAAGTCACGATCAT 10934214 Query 63832 AAATAAT 63838 | || || Sbjct 10934215 AGATTAT 10934221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622907300231840