Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq5124 131 2e-25 >seq5124 Length=26641161 Score = 131 bits (144), Expect = 2e-25 Identities = 129/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 ||||| ||||| ||||| | | |||||||||||||||||||||||||| || |||||| Sbjct 18900144 GAGGGAAAAATGCACGGCTTTTTGCGCATGTACTGGGCCAAAAAGATTCTGGAATGGACT 18900085 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836 || ||||||| |||| | ||||| | || | || ||||| | || ||||| || Sbjct 18900084 GCCACCCCCGAGCGGGCGTTGGAGTACGCGATCTTGCTGAACGACAAGTATAGTCTGGAT 18900025 Query 71837 GGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGG 71883 || |||||||| ||||| ||||| || ||||||||| ||| |||| Sbjct 18900024 GGACGCGATCCCAACGGCTATGTGGGCTGCATGTGGTCAATTGGCGG 18899978 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823 |||| ||||| | || || || || | || || || | ||||| | || | ||| Sbjct 11019181 ACAAGATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAAC 11019240 Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883 || || || ||||| | |||||| |||||| ||||||||||| || ||||| | Sbjct 11019241 CATCGGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAG 11019300 Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943 |||| || | || || | || ||||| || || ||||||| | | | | || |||| Sbjct 11019301 ATCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACT 11019360 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||||||||| || || || ||| | || |||| ||| Sbjct 11019361 ATAACATTCAGAAGGAGTCCACTCTGCACTTGGTGCTG 11019398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478631741673280