Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq5123 86.0 5e-12 >seq5123 Length=25762168 Score = 86.0 bits (94), Expect = 5e-12 Identities = 102/137 (74%), Gaps = 6/137 (4%) Strand=Plus/Plus Query 107645 GTTGCCCAAATCGCCGACGTGACGCTCCGCGGCGTCGGGCGCGCCATGCTGCT---GATG 107701 ||||||||||||||| | |||||| | | || || |||| ||||| |||| || ||| Sbjct 11111932 GTTGCCCAAATCGCCCAGGTGACGGTTCTCGTCGACGGGAGCGCCGTGCTCCTTGCCATG 11111991 Query 107702 CGTAGGATTAAAGTGTTCGCCTGCCGACGTGCACCCATTGCTTGTGTCGCCAAATTCGTG 107761 | ||||| ||||| || | |||| |||| || ||| | |||| || || ||||| Sbjct 11111992 C---GGATTGAAGTGCGGTCCGGACGACATGCAGCCGTTGGTGTTGTCTCCGAACTCGTG 11112048 Query 107762 CACGTGAAAACCGTGCA 107778 |||||| || ||||||| Sbjct 11112049 CACGTGGAATCCGTGCA 11112065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423013581680800