Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq5121 95.1 3e-16 >seq5121 Length=18748788 Score = 95.1 bits (104), Expect = 3e-16 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 |||||| ||| ||||| || | |||| ||| || || |||||||||||||| || Sbjct 15815769 CCCATGGCGCGGGTCTTCCCGAAGGTCACCAAATGCACGTTCCACAAATACGGTCCATCC 15815828 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 ||| || | | | |||| || || ||| | || || |||| | |||||||||||| Sbjct 15815829 GGCAGTGTGCAGACCCACGATGGTCTGTGCGTGCTGCCCCTGAACATTGTCAACGAGAAG 15815888 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||| | ||||| |||||||||||| Sbjct 15815889 ATCTACGTGTTCCTGTGGTTCTGGTTC 15815915 Score = 86.0 bits (94), Expect = 2e-13 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 || || || ||||| || ||||| || || || ||| |||| |||| ||||||||| Sbjct 15790833 TGCACCTTCCACAAGTATGGTCCCTCCGGTTCGCTGCAAAAGCACGACTCCCTCTGCATC 15790774 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCT 3481 || ||| |||| | || |||||||||| |||| | || ||||||||||||||| Sbjct 15790773 CTGCCGCTGAACATTGTGAACGAGAAGACCTACGTGTTTATCTGGTTCTGGTTCT 15790719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479300574000