Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5124 172 5e-38 >seq5124 Length=26641161 Score = 172 bits (190), Expect = 5e-38 Identities = 885/1400 (63%), Gaps = 45/1400 (3%) Strand=Plus/Minus Query 93928 CCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTC 93987 || ||| |||| ||||||||||| |||| | | |||||||| ||| || ||||| Sbjct 10933987 CCGCAGCTGTCGTCGTGTTTCCTTCTGACCATGACTGCCGACTCAATCGAGGGCATTTTT 10933928 Query 93988 GACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTC 94047 | | || | || || | ||||| || | || || || || || ||| || Sbjct 10933927 AAGTCTGTGGAGCAGTGCGCCATGATCTCCAAGTCTGCTGGTGGCATTGGACTCAACGTG 10933868 Query 94048 CACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTC 94107 || | | ||||| | ||| ||| || |||| || || || || ||||| || | Sbjct 10933867 CATTGCATTCGTGCAAAGGGCACCTCGATTTGCGGCACAAACGGAACGTCCAATGGGTTG 10933808 Query 94108 GTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGG 94167 || || |||||| ||||||||||||| | |||||| || ||||||||||| || || | | Sbjct 10933807 GTTCCCATGCTCAGGGTCTTCAACAATGTGGCGCGTTATGTGGACCAGGGAGGCGGCAAG 10933748 Query 94168 AGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATC 94227 | ||| | || || | || || |||||||||||| |||| || | ||| || Sbjct 10933747 CGTCCCGGTGCCTTTGCCATTTACCTGGAGCCCTGGCACTCGGATGTCTTTGAGTTCCTC 10933688 Query 94228 GACCTGCGAAAGAACCAC---GGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCT 94284 || || |||||| || ||||| || | | | ||| | || || || |||||| Sbjct 10933687 GAACT---AAAGAAAAACACGGGCAAGGAAGAGAATCGCGCCCGCGATCTGTTTTACGCT 10933631 Query 94285 CTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTT 94344 || ||| | || || || || ||||| ||||| ||| ||| | ||| || | Sbjct 10933630 CTGTGGATACCCGATCTCTTCATGAAGCGCGTGGAGGCCAACGGTGATTGGTCGCTCATG 10933571 Query 94345 TGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCG--CGTTTTGAAGACTTGT 94402 || ||| | |||| || || | ||| | | ||||| || || ||| | ||| Sbjct 10933570 TGCCCCCACAAATGCCCTGGCC--TCCAAGATGTGTGGGGCGATGAATTCGAAAAGCTGT 10933513 Query 94403 ATGCTCGTTACGAATCGCAGGG-CAAGGC--CAGGAAGGTTATGGATGCTAGGAAGCTGT 94459 ||| ||||| |||| | || | | | | ||||| | ||| |||| Sbjct 10933512 ATGAGAAATACGAGCAAGAGGGTCGAGCCAACCGAACGGTTA---AGGCTCAATCCCTGT 10933456 Query 94460 GGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACT 94519 || || ||| | || | || ||||| || || | || ||||| | ||||||||| Sbjct 10933455 GGTATGCCATCATTGAGGCGCAAGTGGAAACTGGAAATCCGTACATGCTCTTCAAGGACG 10933396 Query 94520 CTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCA 94579 || |||| ||| |||||||||| | | || |||||| || || |||||| Sbjct 10933395 CTTGCAACAGGAAGAGCAACCAGCAGAATGTTGGCACCATCAAGTGCAGCAACTTGTGCA 10933336 Query 94580 CCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCA 94639 | || || || || || | | ||||| ||||| ||||| || ||| ||| ||||| Sbjct 10933335 CGGAAATCGTTGAATACTCCGCGCCGGATGAGATAGCTGTCTGCAACTTGGCATCCATTG 10933276 Query 94640 ACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGC 94699 ||| || || || | | | |||| | ||| | || ||| Sbjct 10933275 CCCTCAACATGTTTGTCACACCGGAGAAGACGTAT------------GATTTCAAGAAGC 10933228 Query 94700 TTGTGAACTTCGCGGGAAGGATGGT---CTTGAACCTGAACAGGGTAATCGACAAGAACT 94756 | | | || | | ||| || | || || |||| | |||| || | |||| Sbjct 10933227 TCAAGGAAGTCAC---CAAGATAGTTACCAGAAATCTAAACAAGATAATTGATATCAACT 10933171 Query 94757 TCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCG 94816 || ||| | || ||||| ||| ||||| ||| ||| || ||| | ||||| || Sbjct 10933170 ATTATCCCTTGCCAGAGGCAAGGAAGTCAAATTTGAGGCACCGTCCCGTGGGCATAGGTA 10933111 Query 94817 TCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGG 94876 | ||||| ||||| ||||| || | | ||||| | || || || || || || | Sbjct 10933110 TTCAGGGATTCGCTGACGCCTTGATTCTCATGCGATTCCCGTATGAAAGTGAAGAAGCCG 10933051 Query 94877 CGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCAT-GAAACAATCCGTC 94935 |||||| | | |||||||||| |||||| || || ||| | ||| | | | || Sbjct 10933050 GTCTGTTGAATCAGCAGATATTCGAAACCATTTACTATGGAGCCTTGGAAGCCAGCTGTG 10932991 Query 94936 CACTTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAAC-A 94994 ||| | ||||| || | || || ||||| | | | || |||| || | | Sbjct 10932990 AACTGGCCCAGACCGAA----GGCCCTTACGAAAC-CTATGAGGGCAGCCCGGTGAGCAA 10932936 Query 94995 GGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGG--GAA 95052 ||| ||||| |||| |||| | |||| | || || || | |||||| ||| Sbjct 10932935 GGGAATTTTGCAGTACGACATGTGGGACAAGGTCCCAACGAACCTTTGGGACTGGCAGAA 10932876 Query 95053 GCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATG 95112 || | | | | | | || |||||||| ||| | ||||| || || || ||| Sbjct 10932875 ACTGAAGGAGTCCA--TCAAGAAGCACGGTGTCCGCAACTCCCTGCTGGTTGCTCCAATG 10932818 Query 95113 CCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCC 95172 ||||| || || || || || || | |||||||| || || ||||| |||| ||| | Sbjct 10932817 CCCACTGCATCTACAGCTCAAATAATGGGCAACAATGAATCCTTCGAGCCCTATACCACG 10932758 Query 95173 AACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTA 95232 ||| | |||| |||||| || || |||| || || | || ||||| | || | | Sbjct 10932757 AACATATACACCAGGCGAGTTCTGTCCGGCGAGTTTCAGGTGGTCAACCATCATTTGTTG 10932698 Query 95233 CGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCC 95292 || ||||| || |||| |||||| ||| | | |||||||| | || | | Sbjct 10932697 CGCGACCTAACAGAGCTGGACTTGTGGGACGACGACATGAAGAACCAGATCATATCCAGC 10932638 Query 95293 AACGGCTCCGTCCAGAACAT 95312 | ||||| |||| ||||| Sbjct 10932637 AGGGGCTCAATCCAAAACAT 10932618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494691512979040