Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5124 159 4e-34 seq5122 100 4e-16 >seq5124 Length=26641161 Score = 159 bits (176), Expect = 4e-34 Identities = 879/1385 (63%), Gaps = 32/1385 (2%) Strand=Plus/Minus Query 112008 TATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGT 112067 || || ||||| |||||| ||||| || | |||||||| || | ||| || Sbjct 10933726 TACCTGGAGCCCTGGCACTCGGATGTCTTTGAGTTCCTCGAACTAAAGAAAAACACGGGC 10933667 Query 112068 GATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 112127 | || ||| || ||||||||| || | |||||| ||||| || |||||||||||| Sbjct 10933666 AAGGAAGAGAATCGCGCCCGCGATCTGTTTTACGCTCTGTGGATACCCGATCTCTTCATG 10933607 Query 112128 AAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTC 112187 ||| | || |||| | || ||||||| ||| | || || |||| || || ||| Sbjct 10933606 AAGCGCGTGGAGGCCAACGGTGATTGGTCGCTCATGTGCCCCCACAAATGCCCTGGCCTC 10933547 Query 112188 TCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGG 112247 |||| ||| || || || ||| || || || |||||| |||| |||| Sbjct 10933546 CAAGATGTGTGGGGCGATGAATTCGAAAAGCTGTATGAGAAATACGAGCAAGAGGGTCGA 10933487 Query 112248 GCGACTGCGACGGTGCCAGCTGCCGAT--GTGTGGAAAGCTATTCTCAAGTCTCAAACCG 112305 || | ||||| ||| | || ||||| | || || | || | ||| | Sbjct 10933486 GCCAACCGAACGGTTAAGGCT--CAATCCCTGTGGTATGCCATCATTGAGGCGCAAGTGG 10933429 Query 112306 AGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGA 112365 | ||||| | || || ||||| | ||| ||||| || ||| ||||| || || ||| Sbjct 10933428 AAACTGGAAATCCGTACATGCTCTTCAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGA 10933369 Query 112366 ATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAG 112425 || | || |||||| | |||| | || || |||||| | |||| | | | Sbjct 10933368 ATGTTGGCACCATCAAGTGCAGCAACTTGTGCACGGAAATCGTTGAATACTCCGCGCCGG 10933309 Query 112426 ATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGA 112485 |||||| ||||| || ||| | ||||| || || ||| || || ||| || ||| Sbjct 10933308 ATGAGATAGCTGTCTGCAACTTGGCATCCATTGCCCTCAACATGTTTGTCACACCGGAG- 10933250 Query 112486 CAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAA 112545 ||||| | ||||| | || ||| | ||||| || || | || || | ||| |||| Sbjct 10933249 --AAGACGTATGATTTCAAGAAGCTCAAGGAAGTCACCAAGATAGTTACCAGAAATCTAA 10933192 Query 112546 ACAGAGTTATTGATAGAAATTTTTACCCCGTTG--AGACTGCTCGTAAATCTAATATGAG 112603 ||| | ||||||| || | ||| ||| ||| ||| || | || || ||| |||| Sbjct 10933191 ACAAGATAATTGATATCAACTATTATCCC-TTGCCAGA-GGCAAGGAAGTCAAATTTGAG 10933134 Query 112604 ACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCA 112663 |||||||| | || | ||| | || || |||| || | || ||||| || Sbjct 10933133 GCACCGTCCCGTGGGCATAGGTATTCAGGGATTCGCTGACGCCTTGATTCTCATGCGATT 10933074 Query 112664 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCA 112723 | | | ||| || ||||| | ||| || ||||| || || || || | Sbjct 10933073 CCCGTATGAAAGTGAAGAAGCCGGTCTGTTGAATCAGCAGATATTCGAAACCATTTACTA 10933014 Query 112724 CGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 112783 | || | || || || | || |||| || || || || || ||||||| ||| Sbjct 10933013 TGGAGCCTTGGAAGCCAGCTGTGAACTGGCCCAGACCGAAGGCCCTTACGAAACCTATGA 10932954 Query 112784 GGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGG--AAGGT-GAGACCA 112839 ||| || | | |||||| | | || | || ||||||| ||||| || | Sbjct 10932953 GGG-CAGCCCGGTGAGCAAGGGAATTTTGCAGTACGACATGTGGGACAAGGTCCCAACGA 10932895 Query 112840 AGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 112899 | ||| | |||||| | || ||||| ||||||| || | ||| | || ||| Sbjct 10932894 ACCTT---TGGGACTGGCAGAAACTGAAGGAGTCCATCAAGAAGCACGGTGTCCGCAACT 10932838 Query 112900 GTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 112959 || || | || |||||||| || || || || || ||||| |||| || ||||||| Sbjct 10932837 CCCTGCTGGTTGCTCCAATGCCCACTGCATCTACAGCTCAAATAATGGGCAACAATGAAT 10932778 Query 112960 GCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGA 113019 ||| || ||||| || |||||||| || || || || | || |||||| | Sbjct 10932777 CCTTCGAGCCCTATACCACGAACATATACACCAGGCGAGTTCTGTCCGGCGAGTTTCAGG 10932718 Query 113020 TTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGA 113079 | |||||| | ||| | || ||||| | |||| | | | ||| | | || |||| Sbjct 10932717 TGGTCAACCATCATTTGTTGCGCGACCTAACAGAGCTGGACTTGTGGGACGACGACATGA 10932658 Query 113080 AGGATCTCATGGT-GAAAGCGGGTGGTTCCATTCAAAATATTGTGG--ATATTCCAGATG 113136 || | | || | ||| || || || || ||||| |||| || || ||||| | Sbjct 10932657 AGAACCAGATCATATCCAGCAGG-GGCTCAATCCAAAACATTGAGGCCATCCCCCAGAGG 10932599 Query 113137 AAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGG 113196 || | ||||| || || ||||||||| | ||| ||| | |||| Sbjct 10932598 --GTTCGCGATCTGTACAAGACGGTGTGGGAAATCTCAGTTAAGTCCACGATTAAAATGG 10932541 Query 113197 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCAT---GGAAA 113253 |||| || |||||| ||||| ||||| ||||| | || |||||| | | | Sbjct 10932540 CCGCCGACCGTGGTGCGTTCATAGATCAGAGTCAGTCGTTCAA--CATTCATGTGGCAGA 10932483 Query 113254 GTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAA 113313 | ||||| ||| || || | || || ||| | ||| ||||| ||||| |||| Sbjct 10932482 GCCCAACTATG-GAAAACTGACCTCCATACACTTTTACTCCTGGAAAGCTGGTCTTAAAA 10932424 Query 113314 CGGGGATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGAAC 113373 | || ||||| || || || | ||| || ||| | |||||||||| | ||||| Sbjct 10932423 CCGGAATGTACTATCTGCGCACAAAGCCAGCTGCGAATGCCATTCAGTTCA-CCGTGAAC 10932365 Query 113374 CAGAA 113378 |||| Sbjct 10932364 AAGAA 10932360 >seq5122 Length=22589142 Score = 100 bits (110), Expect = 4e-16 Identities = 118/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 102238 ||||| || |||| ||||| || ||||| ||||||||| || ||| ||| | Sbjct 17925524 GAGCGTATCATCGCCTTTGCCGCCGTGGAGGGCATCTTCTTCAGCGGCAGCTT-TGCATC 17925582 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 |||| ||||| |||||||| ||||| ||||| || || |||||||||||||||||| Sbjct 17925583 CATTTTCTGGCTTAAGAAGCGCGGTCTAATGCCTGGACTGACCTTCTCCAACGAGCTTAT 17925642 Query 102299 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTG 102335 |||||| |||||||| | ||| || ||||| ||| Sbjct 17925643 CTCTCGCGACGAGGGCTTGCACTGCGACTTTGCCGTG 17925679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620702641449280