Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5122 89.7 6e-13 >seq5122 Length=22589142 Score = 89.7 bits (98), Expect = 6e-13 Identities = 179/263 (68%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 168471 TCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTTG 168530 || ||||| ||| | | || |||||||||||||| | || ||||| || || |||||| Sbjct 4847008 TCTTTACCTCCCGTCAAGCGGGTACCAAATTGACCGCGTGGCTCAAGCAGATTGATGTTG 4846949 Query 168531 TTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTG-TCCGCTAAGGATACTTCACC 168589 || | |||| | | | |||| || || || || || || | |||||| || || Sbjct 4846948 TTGGCACCCACAAAATTCTGGGCCAGATTCACGATTGTCATCTGC-AGGGATACCTCTCC 4846890 Query 168590 ATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTCATC 168649 |||||||| || ||| | || || || || | | || || || ||||||| ||| Sbjct 4846889 GTGGTGGTAGGCCGACATCTCTGCCACCGATCCGGATAGCTGGGCTACCTTCACCTCACG 4846830 Query 168650 CTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGACCATC 168709 |||| || | | ||||||| |||||||||||| ||| ||||| | ||||| Sbjct 4846829 CTTGTCGTTTCTCTTAAAGCAAGTGAACATCACTTTCCGCTGACCCGGCTTTAAGCCATC 4846770 Query 168710 CGCCATATGGGCAATAGAGCGCT 168732 | | | | | ||| ||||||| Sbjct 4846769 CACTAGACTAGGAATGGAGCGCT 4846747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589943011729760