Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq5124 217 1e-51 >seq5124 Length=26641161 Score = 217 bits (240), Expect = 1e-51 Identities = 451/667 (68%), Gaps = 7/667 (1%) Strand=Plus/Plus Query 29725 AAGTCGTCCAGGTTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCC 29784 ||||| || | || || |||| | ||||| |||| |||||||||||| || | Sbjct 3014222 AAGTCATCGATGTCCTGCACCTGACGCTTTATGTTCAGCTTGGGAAAGGGTCGCGGTGTC 3014281 Query 29785 CTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGG 29844 | || ||||| ||||||||| || || || | |||||||||||| | ||| |||| | Sbjct 3014282 CGCTTCAGCTGCTCCTTCAGCGGCTCGACATGGTTCAGGTAGACGTGCGTGTCGCCCATG 3014341 Query 29845 GTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGA 29904 ||||||||||| || ||||| | || || || || || || |||||||| ||||| || Sbjct 3014342 GTGTGGACAAAGTCGCCCGGCTTCAGACCTGTCACATGGGCGATCATGTAGGTGAGCAGG 3014401 Query 29905 GAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGC 29964 | |||| |||||| || |||||||| || || |||||||| | ||||||||||||| Sbjct 3014402 GCGTAGGAGGCGATATTGAAGGGTACGCCCAGGCCCATGTCGGCACTCCTCTGGTAGAGC 3014461 Query 29965 TGACACGAGAGCTCTCCGTCGC----TCACGTAAAACTGACACATGGTGTGGCACGGAGG 30020 || ||||| ||||| ||| ||| ||| ||||||| || ||| ||||| || Sbjct 3014462 TGGCACGATAGCTCACCG-CGCGTGGAGACGAAAAACTGTGCCAGACAGTGACACGGTGG 3014520 Query 30021 AAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTC 30080 || |||| || || || ||||| || ||| ||||||||||| ||| Sbjct 3014521 CAGGACCATCTTTGGCATATCAACAGGATTCCAAGCCGACAAGATGATGCGCCGATCTGA 3014580 Query 30081 TGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTA 30140 || || ||| |||| ||| | | |||||||||| | ||| | || ||| Sbjct 3014581 GGGATTATTCTTGATAGTGTCAATCACCCGACGCAGCTGATCGATTCCCTTGCCGCTGTA 3014640 Query 30141 GTC-TGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCG 30199 ||| | | || || | |||||| || ||||| || | ||||||||| ||||| |||| Sbjct 3014641 GTCGTCGTCGCAGGT-GGCGTACTCCGCCCCGAAGTGTCGCCACTGGAAGCCGTAGACCG 3014699 Query 30200 GTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAAC 30259 | ||||| || || | | | | || ||| |||||| || |||||| | Sbjct 3014700 GGCCCAGATCGCCAACGGAACGCTCCGTTAACCCCAGGCTGTCCAGGAACTCTCTGCTGC 3014759 Query 30260 CGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTC 30319 ||| |||||||||| | || |||| | ||| |||| || || || Sbjct 3014760 TGTTCCCGTCCCAGATGTGCACGTTCTTCGCCTGCAGCAACTTGGCGTCCGTCTTGCCCG 3014819 Query 30320 TGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGA 30379 |||||||||||||||||||| | || || | || || | |||||| || || | Sbjct 3014820 CCACGAACCACAGCAGCTCCTCGGCTACTGCGCGGAAGAACACACGCTTGGTGGTCAGCA 3014879 Query 30380 GGGGAAA 30386 | ||||| Sbjct 3014880 GTGGAAA 3014886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408592082341652