Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12]
5,124 sequences; 152,712,140 total letters
Query= NC_018274.1
Length=36847
Score E
Sequences producing significant alignments: (Bits) Value
seq3473 2194 0.0
seq301 807 0.0
>seq3473
Length=3319
Score = 2194 bits (2432), Expect = 0.0
Identities = 1351/1441 (94%), Gaps = 0/1441 (0%)
Strand=Plus/Plus
Query 30288 CCGGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAAGAACGCACTTGGACGGTCA 30347
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 1 CCGGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAGGAACGCACTTGGACCGTCA 60
Query 30348 GCATTGGCACGGACGGCCCGCCCGTCGTCAATGCGAGGATCGTTTGGAGGCTCCAGGGCG 30407
||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||
Sbjct 61 GCATTGGCACGGACGGCCCGCCCGTCGTCAATGCGCGGATCGTCTGGACGCTCCAGGGCG 120
Query 30408 AGCCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCTTGGACGTTCGCGCCGG 30467
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 121 AGCCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCCTGGACCTTCGCGCCGG 180
Query 30468 ACTGGGGCGACAGCATCGTCGAGCGCCTGAGCGCCTCGACAAATATCCTGCAAAGCGAAT 30527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 ACTGGGGCGACAGCATCGTCGAGCGCCTGAGCGCCTCGACAAATATCCTGCAAAGCGAAT 240
Query 30528 CAGCCGTGACCCAGCGCCGAGCCATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAACA 30587
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 241 CAGCCGTGACCCAGCGCCGGGCTATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAACA 300
Query 30588 TGTACGCGGTGGACCGCGAGCGGCAGCTGCTGGACATGACGCTGTTCGGCTGGGGCGCGC 30647
|||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 301 TGTACGCGGTAGACCGCGAGCGGCAGCTCCTGGACATGACGCTGTTTGGCTGGGGCGCGC 360
Query 30648 GCATTTGGGCGCTGCCTATCTGGCCTGATATCCAGCTGCTCCAGGAACCGCTGGCGGCCG 30707
| |||||||||||||| || |||||||||||||| |||||||| ||||||||||||||||
Sbjct 361 GAATTTGGGCGCTGCCGATTTGGCCTGATATCCAACTGCTCCAAGAACCGCTGGCGGCCG 420
Query 30708 GCTCGCTGAGCATTCCGTGCGGCACGGCCGGCCTCGACTTCCGCGACGGCGGCCTGGCGA 30767
||||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||
Sbjct 421 GCTCGCTGAACATTCCGTGCGACACGGTCGGCCTCGACTTCCGCGACGGCGGTCTGGCGA 480
Query 30768 TGCTGCGCGGCGAGGACGCTTTTGCTTATGAGGTCGTCGAGGTCAAGACGGTGACCGCCA 30827
||||||||||||||||||| || | ||||| ||||||||||||||| | |||||||||
Sbjct 481 TGCTGCGCGGCGAGGACGCCTTCACCTATGAAGTCGTCGAGGTCAAGGCAGTGACCGCCG 540
Query 30828 GCGGCCTGGACCTGGTTCGGCCCGTCCAGGCCGCCTGGGGAACTGGCTCGCGACTGTACC 30887
||||||||||||||| || |||||||||||| |||||| ||||||||||||||||||||
Sbjct 541 CCGGCCTGGACCTGGTCCGCCCCGTCCAGGCCACCTGGGTAACTGGCTCGCGACTGTACC 600
Query 30888 CGGTGCGCACCGCGCAGCTGACCGAGCAGCCCACGCTGACCCGGCTGACCGATACCGCGC 30947
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 601 CGGTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATACCGCGC 660
Query 30948 AGTCTGCGCGGGTGTCGTTCCTTGTGATGGAACCCAGCAGTTGGCCCGAGGTGATGCCGG 31007
|||||||||||||||||||||| | ||||| |||||| ||||||||||| |||||||
Sbjct 661 AGTCTGCGCGGGTGTCGTTCCTGATAATGGAGCCCAGCGCCTGGCCCGAGGTAATGCCGG 720
Query 31008 CGACGATGTACCGGGGGCGTCCTGTCCTGGAACAGCGCCCGGACGAAAGCGAAGACCTGA 31067
|||||| ||| ||||||| || || ||||| |||||||||||||||||||||||||| |
Sbjct 721 CGACGACCTACAGGGGGCGGCCAGTGCTGGAGCAGCGCCCGGACGAAAGCGAAGACCTCA 780
Query 31068 CGTCGAGCTATCAGCGCCTGCTGTCCACCCTGGATAACGGCAGCGCCATTCCCCGCGTGA 31127
| || ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 781 CCTCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCGCGTGA 840
Query 31128 CCGACGTCGCCGGCATGGCGCTGCCCGTCATCGGCCATCGGTGGATCGGCATGGGCCGAG 31187
||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 841 CCGACGTCGCCGGGATGGCGCTGCCCGTCATCGGTCATCGCTGGATCGGCATGGGCCGAG 900
Query 31188 CCGAACGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTACGCGGCCAGCAGAAGCCGCTGT 31247
|||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| |
Sbjct 901 CCGAGCGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTGCGAGGCCAGCAGAAGCCGCTAT 960
Query 31248 GGGTGCCGACCCACGCCGACGACCTGACCCTGGTCGCCACCGTCTCGCAGCTGTCCACCG 31307
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 961 GGGTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGTCCACTG 1020
Query 31308 CGCTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAACGGCCGGCCGGGCCGTCGCG 31367
|||||||||||||||||||||||||||||||||||||||| || || ||||| |||||||
Sbjct 1021 CGCTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAATGGGCGACCGGGTCGTCGCG 1080
Query 31368 ATATCCGCATCGAGCTATACGACGGCACGGTCTATCACCGCCGCATCCTCACCAGCACAG 31427
|||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct 1081 ATATCCGCATCGAGCTGTACGACGGCACCGTCTATCACCGCCGCATTCTCACCAGCACCG 1140
Query 31428 AGCTGGACGCCGACACCGAGCGCTTGGCCATCGATGCCGCCCTGGGCCGGCTGGTCGAGC 31487
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1141 AGCTGGACGCCGACACCGAGCGCTTGGCCATCGACGCCGCCCTGGGCCGCCTGGTCGAGC 1200
Query 31488 CTGGTGACGTGGCGCGCATTTGTTTCATGGCGCTCTGTAGCGCCGCCACCGACGTGGTCG 31547
| || || |||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 1201 CGACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCGCCAGCGACGTGGTCG 1260
Query 31548 AGATCGAGCACGTCACTGATAGCGAGGGCGTAGCAACTGCCGCCCTGACGTTCAAAGGGG 31607
|||| ||||||||||| |||||||||||||| ||||| ||||| ||||| ||||||||||
Sbjct 1261 AGATTGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCCGCGCTGACATTCAAAGGGG 1320
Query 31608 TTCGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGG 31667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 TTCGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGG 1380
Query 31668 CTGTACCAGTTCAGCCGTGGAGCCATCCGCTGGAGCTACAACAGCAGCGACCGGGACATC 31727
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1381 CTGTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGCAGCGACCGGGACATC 1440
Query 31728 A 31728
|
Sbjct 1441 A 1441
Score = 1130 bits (1252), Expect = 0.0
Identities = 725/785 (92%), Gaps = 7/785 (1%)
Strand=Plus/Plus
Query 34106 GACCGGACGCCTCGGGCGATCACTGTGCGCCGCCTGATCGAGGCGCCATATCGTGAGCTG 34165
|||||||||||||||||||||||||||||||||||||||||||| || ||||| || |
Sbjct 2536 GACCGGACGCCTCGGGCGATCACTGTGCGCCGCCTGATCGAGGCACCCTATCGCGAACCT 2595
Query 34166 GCC---GGCGTGATTGATCCTG-CGAATCTCCAGCTCCTGGACGTGTCCGCATCGT-ACC 34220
||| |||||||| ||||| | | ||||||||||||||||||||| ||| || | ||
Sbjct 2596 GCCCCGGGCGTGATCGATCCCGGCAAATCTCCAGCTCCTGGACGTGAGCGCGTCCTTACT 2655
Query 34221 TGGCTGCGCTGGCC-GAGGCACCGACCAGCCTGTCGCAGAGCTACACCCTGACCGACCGC 34279
|||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 2656 TGGCCGCGCTGGCCCGAGGCGCCGACCAGCCTGTCGCAGAGCTACACACTGACCGACCGC 2715
Query 34280 GTCGGCAGCTCTGGCGCGTTCGTTGATCGCGGAACCGGGGATTGGTGCCCGACCGGCCTG 34339
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 2716 GTCGGCAGCTCTGGCGCGTTCGTTGATCGCGGAACCGGCGACTGGTGCCCGACCGGACTA 2775
Query 34340 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGACCGAACGTCGTCACGCTGACGAACGCTAGC 34399
||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||
Sbjct 2776 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGTCCGAACGTCGTCACGTTGACGAACGCCAGC 2835
Query 34400 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCTGTGGTGGACGACGAGATAGTCCGGGTG 34459
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 2836 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCAGTCGTGGACGACGAGATAGTCCGGGTC 2895
Query 34460 GATGCGGTCAACTACGCCAGCGGTACTGTCACCCTGGCACGCGGCTGCGCCGATACCGTA 34519
||||||||||||||||||||||| || |||||||| || |||||||||||||||||||||
Sbjct 2896 GATGCGGTCAACTACGCCAGCGGCACGGTCACCCTCGCGCGCGGCTGCGCCGATACCGTA 2955
Query 34520 CCAGCCAAGCACCTGGCCGGGGCTCGGGTCTGGTTCTATGACACGTTCGAAGCGGTGGAC 34579
|| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 2956 CCGGCCAAGCATCTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCTGTGGAC 3015
Query 34580 GAGACGGTCTACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACCAACACCAGCGAG 34639
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3016 GAAACGGTCTACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACGAACACCAGCGAG 3075
Query 34640 GGCCAGCTCGCCCCGGCGCTGGCCGCCACCGACAGCCTGACGCTGACCGGGCGCCAAGGT 34699
||||| || ||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 3076 GGCCAACTGGCCCCGGCGCTGGCCGCCACCGACAGCCTCACCCTGACCGGGCGCCAAGGT 3135
Query 34700 AAGCCGTACCCGCCCGGCCAGTTTCGCATCAACGGCAGCGCGTACCCGGCCAAGGTCTAC 34759
|||||||| |||||||||||||| ||||||||||||||||||||||| | || ||||||
Sbjct 3136 AAGCCGTATCCGCCCGGCCAGTTCCGCATCAACGGCAGCGCGTACCCAACGAAAGTCTAC 3195
Query 34760 GGGGCGTTGTCTGTGAGCTGGGCGATGCGCGACCGGATCGGCCAGGCCGACCAGTTGATC 34819
|||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3196 GGGGCGCTGTCGGTGAGCTGGGCGAAGCGCGACCGGATCGGCCAGGCCGACCAGTTGATC 3255
Query 34820 GATACCACGGTCGGCAACATCGGGCCCGAAGATGGGGCGACGGTGACGCTCCAGGTCTAC 34879
||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| |||
Sbjct 3256 GATACCACGGTCGGCAACATCGGACCCGAAGATGGGGCGACGGTTACGCTCCTGGT-TAC 3314
Query 34880 AGCGG 34884
|||||
Sbjct 3315 AGCGG 3319
>seq301
Length=948
Score = 807 bits (894), Expect = 0.0
Identities = 462/472 (98%), Gaps = 0/472 (0%)
Strand=Plus/Plus
Query 7607 CCGCAGACCCGCGAACAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 7666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3 CCGCAGACCCGCGAACAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 62
Query 7667 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 7726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 63 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 122
Query 7727 GAGCCGGCCGAAGACTTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 7786
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 GAGCCGGCCGAAGACCTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 182
Query 7787 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACC 7846
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACA 242
Query 7847 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 7906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 302
Query 7907 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGTTTCATCCGCGTCAAGGAAGAGGTG 7966
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 303 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGCTTCATCCGCACCAAGGAAGAGGTG 362
Query 7967 AACAAGGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTTCCGGGGCTGACCGTG 8026
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 363 AACAAGGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTGCCGGGGCTGACCCTG 422
Query 8027 AACTCCGGCATCGAAGACTTCGCAATCGTGCCTTTCGAAGCGGAGGTGCAGT 8078
||| |||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 423 AACACCGGCATCGAGGACTTCGCCATCGTGCCTTTCGAAGCGGAGGTGCAGT 474
Score = 345 bits (382), Expect = 1e-90
Identities = 198/201 (99%), Gaps = 1/201 (0%)
Strand=Plus/Plus
Query 8273 AGGACGTGTGACATGGCCCGCAACCGCGCGCAACAGCTGTGCATCGTCACCTTGGACTAT 8332
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 749 AGGACGTGTGACATGGCACGCAACCGCGCGCAACAGCTGTGCATCG-CACCTTGGACTAT 807
Query 8333 CAGCGCTTCCTGTTACCCCAGGCTGATGCACTCAAGCTGATAGACATCATGAGTCGAGCC 8392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 808 CAGCGCTTCCTGTTACCCCAGGCTGATGCACTCAAGCTGATAGACATCATGAGTCGAGCC 867
Query 8393 GCAGAGGTTCAGGCCGACTACGCCTCTGGAGCTGGGTTCAAGTACACCGTCGGCGAAGTG 8452
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 868 GCAGAGGTTCAGGCCGACTACGCCTCTGGAGCTGGATTCAAGTACACCGTCGGCGAAGTG 927
Query 8453 CCGGAAGTCGAGTTGACGATA 8473
|||||||||||||||||||||
Sbjct 928 CCGGAAGTCGAGTTGACGATA 948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117781632845992
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