Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq5124 89.7 4e-13 >seq5124 Length=26641161 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 13736 CCGCATATTGACCACATGCAACCGGCATAACCGTTGGGATCGCGTCCATCCAAACTGTAT 13795 |||| |||||||||||||| || |||| |||||||||||||||||||||| ||| || Sbjct 18899978 CCGCCAATTGACCACATGCAGCCCACATAGCCGTTGGGATCGCGTCCATCCAGACTATAC 18900037 Query 13796 TTGTCGTTGAAATATATGGCGTTGATTAAAGCCACTGTAGGCGAAATAGACCATTCTAAT 13855 |||||||| | | || |||| || ||| || | || |||||| | Sbjct 18900038 TTGTCGTTCAGCAAGATCGCGTACTCCAACGCCCGCTCGGGGGTGGCAGTCCATTCCAGA 18900097 Query 13856 AtttttttAGCCCAATATATTCTCATATATCCGTGCATTTTGCC 13899 || ||||| ||||| || || | || | | ||||||||||| || Sbjct 18900098 ATCTTTTTGGCCCAGTACATGCGCAAAAAGCCGTGCATTTTTCC 18900141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396253652909268