Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_020198.1 Length=36947 Score E Sequences producing significant alignments: (Bits) Value seq3473 2226 0.0 seq301 807 0.0 >seq3473 Length=3319 Score = 2226 bits (2468), Expect = 0.0 Identities = 1357/1439 (94%), Gaps = 0/1439 (0%) Strand=Plus/Plus Query 30329 GGCCAGGCGTCGCCGCCGCTGGGTTTCGCCGCCCTGGAGGAACGCACCTGGACCGTCAGC 30388 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 3 GGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAGGAACGCACTTGGACCGTCAGC 62 Query 30389 ATTGGCACGGACGGCCCGCCCGTCGTCAATGCGAGGATCGTCTGGAGACTCCAGGGCGAG 30448 ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 63 ATTGGCACGGACGGCCCGCCCGTCGTCAATGCGCGGATCGTCTGGACGCTCCAGGGCGAG 122 Query 30449 CCGAACCTGGTCCTGGTCATCACTGGCAATCGCATCATCGCCTGGACGTTCGCACCGGAC 30508 ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 123 CCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCCTGGACCTTCGCGCCGGAC 182 Query 30509 TGGGGCGACAGCATCGTCGAACGCCTGAGCGCATCGACAAATATCCTGCAAAGCGAATCG 30568 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 183 TGGGGCGACAGCATCGTCGAGCGCCTGAGCGCCTCGACAAATATCCTGCAAAGCGAATCA 242 Query 30569 GCCGTGACCCAGCGCCGAGCCATGCGCCTGGCGCCGCGCCGAGAGTTCGACGCGAACATG 30628 ||||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||| Sbjct 243 GCCGTGACCCAGCGCCGGGCTATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAACATG 302 Query 30629 TACGCGGTGGATCGCGAGCGGCAGCTGCTGGACATGACGCTGTTCGGCTGGGGCGCGCGC 30688 |||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 303 TACGCGGTAGACCGCGAGCGGCAGCTCCTGGACATGACGCTGTTTGGCTGGGGCGCGCGA 362 Query 30689 ATTTGGGCGCTGCCGATCTGGCCTGATATCCAGCTGCTCCACCAGCCGCTGGCGGCCGGG 30748 ||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct 363 ATTTGGGCGCTGCCGATTTGGCCTGATATCCAACTGCTCCAAGAACCGCTGGCGGCCGGC 422 Query 30749 TCGCTGGGCATTCCGTGCGACACGGCCGGCCTCGACTTCCGCGACGGCGGTCTAGCGATG 30808 |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 423 TCGCTGAACATTCCGTGCGACACGGTCGGCCTCGACTTCCGCGACGGCGGTCTGGCGATG 482 Query 30809 CTGCGCGGTGAGGACGCTTTTACTTATGAGGTCGTCGAGGTCAAGACGGTGACCGCCAGC 30868 |||||||| |||||||| || || ||||| ||||||||||||||| | ||||||||| | Sbjct 483 CTGCGCGGCGAGGACGCCTTCACCTATGAAGTCGTCGAGGTCAAGGCAGTGACCGCCGCC 542 Query 30869 GGCCTGGACCTGGTTCGGCCCGTCCAGGCCGCCTGGGGAACTGGCTCGCGACTGTACCCG 30928 |||||||||||||| || |||||||||||| |||||| |||||||||||||||||||||| Sbjct 543 GGCCTGGACCTGGTCCGCCCCGTCCAGGCCACCTGGGTAACTGGCTCGCGACTGTACCCG 602 Query 30929 GTACGCACCGCGCAGCTGACCGAGCAGCCCACGCTGACCCGGCTGACCGATACCGCGCAG 30988 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 603 GTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATACCGCGCAG 662 Query 30989 TCTGCGCGGGTGTCGTTCCTAGTGATGGAGCCCAGCGCCTGGCCGGAACTCATGCCGGCG 31048 |||||||||||||||||||| | |||||||||||||||||||| || | ||||||||| Sbjct 663 TCTGCGCGGGTGTCGTTCCTGATAATGGAGCCCAGCGCCTGGCCCGAGGTAATGCCGGCG 722 Query 31049 ACGACCTACCGGGGTCGGCCAGTCCTGGAGCAGCGCCCGGACGAAAGCGAAGACCTCACT 31108 ||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 723 ACGACCTACAGGGGGCGGCCAGTGCTGGAGCAGCGCCCGGACGAAAGCGAAGACCTCACC 782 Query 31109 TCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCCATTCCCCGCGTGACC 31168 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 783 TCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCGCGTGACC 842 Query 31169 GACGTCGCCGGCATGGCGCTGCCCGTCATCGGCCATCGGTGGATCGGCATGGGCCGAGCC 31228 ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 843 GACGTCGCCGGGATGGCGCTGCCCGTCATCGGTCATCGCTGGATCGGCATGGGCCGAGCC 902 Query 31229 GAGCGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTACGCGGCCAGCAGAAGCCGCTATGG 31288 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 903 GAGCGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTGCGAGGCCAGCAGAAGCCGCTATGG 962 Query 31289 GTGCCGACCCACGCCGATGACCTGACGCTGGTCGCCACCGTCTCGCAGCTGTCCACCGCC 31348 ||||||||||||||||| |||||||| || |||||||||||||||||||||||||| || Sbjct 963 GTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGTCCACTGCG 1022 Query 31349 TTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAACGGCCGGCCGGGCCGTCGCGAC 31408 ||||||||||||||||||||||||||||||||||||| || || ||||| |||||||| Sbjct 1023 CTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAATGGGCGACCGGGTCGTCGCGAT 1082 Query 31409 ATCCGTATCGAGCTGTACGACGGCACGGTCTATCACCGCCGCATCCTCACCAGCACTGAG 31468 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct 1083 ATCCGCATCGAGCTGTACGACGGCACCGTCTATCACCGCCGCATTCTCACCAGCACCGAG 1142 Query 31469 CTGGACGCCGACACCGAGCGCGTGGCCATCGACGCCGCCCTGGGCCGCCTGGTCGAGCCG 31528 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1143 CTGGACGCCGACACCGAGCGCTTGGCCATCGACGCCGCCCTGGGCCGCCTGGTCGAGCCG 1202 Query 31529 ACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGTGCCGCCAGCGACGTGGTCGAG 31588 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1203 ACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCGCCAGCGACGTGGTCGAG 1262 Query 31589 ATCGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCCGCGCTGACATTCAAAGGGGTT 31648 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1263 ATTGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCCGCGCTGACATTCAAAGGGGTT 1322 Query 31649 CGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGTCT 31708 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1323 CGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGGCT 1382 Query 31709 GTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGCAGCGACCGGGACATCA 31767 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1383 GTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGCAGCGACCGGGACATCA 1441 Score = 1133 bits (1256), Expect = 0.0 Identities = 726/785 (92%), Gaps = 7/785 (1%) Strand=Plus/Plus Query 34135 GACCGGACGCCTCGGGCGATCACTGTGCGGCGTTTGATCGAGGCGCCATATCGCGAGCTG 34194 ||||||||||||||||||||||||||||| || |||||||||| || |||||||| | Sbjct 2536 GACCGGACGCCTCGGGCGATCACTGTGCGCCGCCTGATCGAGGCACCCTATCGCGAACCT 2595 Query 34195 GCC---GGGGTGATCGATCCGGCCAACT-TGCAGCTCCTGGACGTGTCCGCGTCGTACCT 34250 ||| || ||||||||||| | ||| | | ||||||||||||||| |||||| | || Sbjct 2596 GCCCCGGGCGTGATCGATCCCGGCAAATCTCCAGCTCCTGGACGTGAGCGCGTCCTTACT 2655 Query 34251 TG-CCGCCTTGGCC-GAGGCGCCGACCAGCCTGTCGCAGAGCTACACCTTGACCGACCGC 34308 || |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2656 TGGCCGCGCTGGCCCGAGGCGCCGACCAGCCTGTCGCAGAGCTACACACTGACCGACCGC 2715 Query 34309 GTCGGCAGTTCTGGCGCGTTCGTGGATCGCGGAACCGGCGACTGGTGCCCGACCGGGCTA 34368 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 2716 GTCGGCAGCTCTGGCGCGTTCGTTGATCGCGGAACCGGCGACTGGTGCCCGACCGGACTA 2775 Query 34369 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGGCCGAACGTGGTCACGCTGACCAACGCCACC 34428 ||||||||||||||||||||||||||||| |||||||| |||||| |||| ||||||| | Sbjct 2776 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGTCCGAACGTCGTCACGTTGACGAACGCCAGC 2835 Query 34429 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCTGTGGTGGACGACGAGATAGTCCGGGTC 34488 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 2836 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCAGTCGTGGACGACGAGATAGTCCGGGTC 2895 Query 34489 GATGCGGTCAACTATGCCAGTGGCACCGTCACCCTGGCGCGCGGCTGCGCCGATACCGTG 34548 |||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct 2896 GATGCGGTCAACTACGCCAGCGGCACGGTCACCCTCGCGCGCGGCTGCGCCGATACCGTA 2955 Query 34549 CCGGCCAAGCACTTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCGGTGGAC 34608 ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2956 CCGGCCAAGCATCTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCTGTGGAC 3015 Query 34609 GAAACGGTATACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACGAACACCAGCGAG 34668 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3016 GAAACGGTCTACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACGAACACCAGCGAG 3075 Query 34669 GGCCAACTGGCCCCGGCGCTGGCTGCCACCGACAGCCTCACCCTGACCGGGCGCCAGGGC 34728 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 3076 GGCCAACTGGCCCCGGCGCTGGCCGCCACCGACAGCCTCACCCTGACCGGGCGCCAAGGT 3135 Query 34729 AAGCCGTATCCGCCCGGCCAGTTCCGCATCAACGGCAGCGCGTACCCAACGAAAGTCTAC 34788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3136 AAGCCGTATCCGCCCGGCCAGTTCCGCATCAACGGCAGCGCGTACCCAACGAAAGTCTAC 3195 Query 34789 GGGGCGCTGTCGGTGAGCTGGGCGAAGCGCGACCGCATTGGACAGGCCGACCAGCTGATC 34848 ||||||||||||||||||||||||||||||||||| || || |||||||||||| ||||| Sbjct 3196 GGGGCGCTGTCGGTGAGCTGGGCGAAGCGCGACCGGATCGGCCAGGCCGACCAGTTGATC 3255 Query 34849 GATACCACAGTCGGCAACATCGGGCCCGAAGATGGGGCGACGGTGACGCTCCAGGTCTAC 34908 |||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| ||| Sbjct 3256 GATACCACGGTCGGCAACATCGGACCCGAAGATGGGGCGACGGTTACGCTCCTGGT-TAC 3314 Query 34909 AGCGG 34913 ||||| Sbjct 3315 AGCGG 3319 >seq301 Length=948 Score = 807 bits (894), Expect = 0.0 Identities = 462/472 (98%), Gaps = 0/472 (0%) Strand=Plus/Plus Query 7645 CCGCAGACCCGCGAACAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 7704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3 CCGCAGACCCGCGAACAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 62 Query 7705 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 7764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 122 Query 7765 GAGCCGGCCGAAGACTTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 7824 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 GAGCCGGCCGAAGACCTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 182 Query 7825 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACC 7884 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACA 242 Query 7885 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 7944 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 302 Query 7945 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGTTTCATCCGCGTCAAGGAAGAGGTG 8004 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct 303 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGCTTCATCCGCACCAAGGAAGAGGTG 362 Query 8005 AACAAGGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTTCCGGGGCTGACCGTG 8064 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct 363 AACAAGGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTGCCGGGGCTGACCCTG 422 Query 8065 AACTCCGGCATCGAAGACTTCGCAATCGTGCCTTTCGAAGCGGAGGTGCAGT 8116 ||| |||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 423 AACACCGGCATCGAGGACTTCGCCATCGTGCCTTTCGAAGCGGAGGTGCAGT 474 Score = 345 bits (382), Expect = 1e-90 Identities = 198/201 (99%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 8311 AGGACGTGTGACATGGCCCGCAACCGCGCGCAACAGCTGTGCATCGTCACCTTGGACTAT 8370 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 749 AGGACGTGTGACATGGCACGCAACCGCGCGCAACAGCTGTGCATCG-CACCTTGGACTAT 807 Query 8371 CAGCGCTTCCTGTTACCCCAGGCTGATGCACTCAAGCTGATAGACATCATGAGTCGAGCC 8430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 808 CAGCGCTTCCTGTTACCCCAGGCTGATGCACTCAAGCTGATAGACATCATGAGTCGAGCC 867 Query 8431 GCAGAGGTTCAGGCCGACTACGCCTCTGGAGCTGGGTTCAAGTACACCGTCGGCGAAGTG 8490 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 868 GCAGAGGTTCAGGCCGACTACGCCTCTGGAGCTGGATTCAAGTACACCGTCGGCGAAGTG 927 Query 8491 CCGGAAGTCGAGTTGACGATA 8511 ||||||||||||||||||||| Sbjct 928 CCGGAAGTCGAGTTGACGATA 948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118101613374792