Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_020202.1 Length=37740 Score E Sequences producing significant alignments: (Bits) Value seq3473 2163 0.0 seq301 830 0.0 >seq3473 Length=3319 Score = 2163 bits (2398), Expect = 0.0 Identities = 1343/1439 (93%), Gaps = 0/1439 (0%) Strand=Plus/Plus Query 31108 GGCCAGGCGTCGCCGCCGCTGGGTTTCGCCGCCCTGGAGGAACGCACCTGGACCGTCAGC 31167 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 3 GGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAGGAACGCACTTGGACCGTCAGC 62 Query 31168 ATTGGCACGGACGGCCCGCCCGTCGTCAATGCGAGGATCGTCTGGAGACTCCAGGGCGAG 31227 ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 63 ATTGGCACGGACGGCCCGCCCGTCGTCAATGCGCGGATCGTCTGGACGCTCCAGGGCGAG 122 Query 31228 CCGAACCTGGTCCTGGTCATCACTGGCAATCGCATCATCGCCTGGACGTTCGCACCGGAC 31287 ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 123 CCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCCTGGACCTTCGCGCCGGAC 182 Query 31288 TGGGGCGACAGCATCGTCGAACGCCTGAGCGCATCGACAAATATCCTGCAAAGCGAATCG 31347 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 183 TGGGGCGACAGCATCGTCGAGCGCCTGAGCGCCTCGACAAATATCCTGCAAAGCGAATCA 242 Query 31348 GCCGTGACCCAGCGCCGAGCCATGCGCCTGGCGCCGCGCCGAGAGTTCGACGCGAACATG 31407 ||||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||| Sbjct 243 GCCGTGACCCAGCGCCGGGCTATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAACATG 302 Query 31408 TACGCGGTGGATCGCGAGCGGCAGCTGCTGGACATGACGCTGTTCGGCTGGGGCGCGCGC 31467 |||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 303 TACGCGGTAGACCGCGAGCGGCAGCTCCTGGACATGACGCTGTTTGGCTGGGGCGCGCGA 362 Query 31468 ATTTGGGCGCTGCCGATCTGGCCTGATATCCAGCTGCTCCACCAGCCGCTGGCGGCCGGG 31527 ||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct 363 ATTTGGGCGCTGCCGATTTGGCCTGATATCCAACTGCTCCAAGAACCGCTGGCGGCCGGC 422 Query 31528 TCGCTGGGCATTCCGTGCGACACGGCCGGCCTCGACTTCCGCGACGGCGGTCTAGCGATG 31587 |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 423 TCGCTGAACATTCCGTGCGACACGGTCGGCCTCGACTTCCGCGACGGCGGTCTGGCGATG 482 Query 31588 CTGCGCGGTGAGGACGCTTTTACTTATGAGGTCGTCGAGGTCAAGACGGTGACCGCCAGC 31647 |||||||| |||||||| || || ||||| ||||||||||||||| | ||||||||| | Sbjct 483 CTGCGCGGCGAGGACGCCTTCACCTATGAAGTCGTCGAGGTCAAGGCAGTGACCGCCGCC 542 Query 31648 GGCCTGGACCTGGTCCGGCCCGTCCAGGCTGCCTGGAGAACTGGCTCCCGGTTGTACCCG 31707 ||||||||||||||||| ||||||||||| ||||| ||||||||| || |||||||| Sbjct 543 GGCCTGGACCTGGTCCGCCCCGTCCAGGCCACCTGGGTAACTGGCTCGCGACTGTACCCG 602 Query 31708 GTACGCACCGCGCAGCTGACCGAGCAGCCCACGCTGACCCGGCTGACCGATACCGCGCAG 31767 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 603 GTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATACCGCGCAG 662 Query 31768 TCTGCGCGGGTGTCGTTCCTGGTGATGGAACCCAGCAGTTGGCCCGAGGTGATGCCGGCG 31827 ||||||||||||||||||||| | ||||| |||||| ||||||||||| ||||||||| Sbjct 663 TCTGCGCGGGTGTCGTTCCTGATAATGGAGCCCAGCGCCTGGCCCGAGGTAATGCCGGCG 722 Query 31828 ACGATGTACCGGGGGCGTCCTGTCCTGGAACAGCGCCCGGACGAAAGCGAAGACCTCACC 31887 |||| ||| ||||||| || || ||||| |||||||||||||||||||||||||||||| Sbjct 723 ACGACCTACAGGGGGCGGCCAGTGCTGGAGCAGCGCCCGGACGAAAGCGAAGACCTCACC 782 Query 31888 TCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCGCGTGACC 31947 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 783 TCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCGCGTGACC 842 Query 31948 GACGTCGCCGGCATGGCGCTGCCCGTCATCGGCCATCGCTGGATCGGTATGGGCCGAGCC 32007 ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 843 GACGTCGCCGGGATGGCGCTGCCCGTCATCGGTCATCGCTGGATCGGCATGGGCCGAGCC 902 Query 32008 GAGCGGTCGGCGTTCCGTAGCCTGGTCTATGCGCTGCGCGGCCAGCAGAAGCCGCTATGG 32067 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 903 GAGCGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTGCGAGGCCAGCAGAAGCCGCTATGG 962 Query 32068 GTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGTCCACCGCG 32127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 963 GTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGTCCACTGCG 1022 Query 32128 CTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAACGGCCGGCCGGGCCGTCGCGAT 32187 |||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct 1023 CTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAATGGGCGACCGGGTCGTCGCGAT 1082 Query 32188 ATCCGCATCGAGCTATACGACGGCACGGTCTATCACCGCCGCATCCTCACCAGCACAGAG 32247 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct 1083 ATCCGCATCGAGCTGTACGACGGCACCGTCTATCACCGCCGCATTCTCACCAGCACCGAG 1142 Query 32248 CTGGACGCCGACACCGAGCGCTTGGCCATCGATGCCGCCCTGGGCCGGCTGGTCGAGCCT 32307 |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 1143 CTGGACGCCGACACCGAGCGCTTGGCCATCGACGCCGCCCTGGGCCGCCTGGTCGAGCCG 1202 Query 32308 GGTGACGTGGCGCGCATTTGTTTCATGGCGCTCTGTAGCGCCGCCACCGACGTGGTCGAG 32367 || || |||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 1203 ACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCGCCAGCGACGTGGTCGAG 1262 Query 32368 ATCGAGCACGTCACTGATAGCGAGGGCGTAGCAACTGCCGCCCTGACGTTCAAAGGGGTT 32427 || ||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||||||| Sbjct 1263 ATTGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCCGCGCTGACATTCAAAGGGGTT 1322 Query 32428 CGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGGCT 32487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1323 CGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGGCT 1382 Query 32488 GTACCAGTTCAGCCGTGGAGCCATCCGCTGGAGCTACAACAGCAGCGACCGGGACATCA 32546 |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 1383 GTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGCAGCGACCGGGACATCA 1441 Score = 1124 bits (1246), Expect = 0.0 Identities = 724/785 (92%), Gaps = 7/785 (1%) Strand=Plus/Plus Query 34924 GACCGGACGCCTCGGGCGATCACTGTGCGCCGACTGATCGAGGCGCCATATCGCGAACTG 34983 |||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| Sbjct 2536 GACCGGACGCCTCGGGCGATCACTGTGCGCCGCCTGATCGAGGCACCCTATCGCGAACCT 2595 Query 34984 GCC---GGCGTGATCGATCC-GGCGAATCTCCAGCTCCTGGACGTGTCCGCATCCT-ACC 35038 ||| |||||||||||||| ||| ||||||||||||||||||||| ||| |||| || Sbjct 2596 GCCCCGGGCGTGATCGATCCCGGCAAATCTCCAGCTCCTGGACGTGAGCGCGTCCTTACT 2655 Query 35039 TCGCTGCGCTGGCC-GAGGCGCCGACAAGCTTGTCGCAGAGCTACACCTTGACCGACCGC 35097 | || ||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||| Sbjct 2656 TGGCCGCGCTGGCCCGAGGCGCCGACCAGCCTGTCGCAGAGCTACACACTGACCGACCGC 2715 Query 35098 GTCGGCAGTTCTGGCGCGTTCGTGGATCGCGGAACCGGCGACTGGTGCCCGACCGGGCTA 35157 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 2716 GTCGGCAGCTCTGGCGCGTTCGTTGATCGCGGAACCGGCGACTGGTGCCCGACCGGACTA 2775 Query 35158 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGGCCGAACGAGGTCACGCTGACCAACGCCACC 35217 ||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||| | Sbjct 2776 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGTCCGAACGTCGTCACGTTGACGAACGCCAGC 2835 Query 35218 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCTGTGGTGGACGACGAGATAGTCCGGGTC 35277 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 2836 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCAGTCGTGGACGACGAGATAGTCCGGGTC 2895 Query 35278 GATGCGGTCAACTATGCCAGTGGCACCGTCACCCTGGCGCGCGGCTGCGCCGATACCGTT 35337 |||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct 2896 GATGCGGTCAACTACGCCAGCGGCACGGTCACCCTCGCGCGCGGCTGCGCCGATACCGTA 2955 Query 35338 CCGGCCAAGCACTTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCGGTGGAC 35397 ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2956 CCGGCCAAGCATCTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCTGTGGAC 3015 Query 35398 GAGACGGTCTACAGCCAGGGCGTGACGCTTCAGGCCCGGCTGCTGACCAACACCAGCGAG 35457 || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 3016 GAAACGGTCTACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACGAACACCAGCGAG 3075 Query 35458 GGCCAGTTGGCCCCGGCGCTGGCCGCTACCGACAGCCTGACGCTGACCGGGCGCCAAGGT 35517 ||||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct 3076 GGCCAACTGGCCCCGGCGCTGGCCGCCACCGACAGCCTCACCCTGACCGGGCGCCAAGGT 3135 Query 35518 AAGCCATACCCGCCAGGCCAGTTTCGCATCAACGGCAGCGCGTACCCGGCCAAGGTCTAC 35577 ||||| || ||||| |||||||| ||||||||||||||||||||||| | || |||||| Sbjct 3136 AAGCCGTATCCGCCCGGCCAGTTCCGCATCAACGGCAGCGCGTACCCAACGAAAGTCTAC 3195 Query 35578 GGGGCGCTGTCGGTGAGCTGGGCGAAGCGCGACCGGATCGGCCAGGCCGACCAGTTGATC 35637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3196 GGGGCGCTGTCGGTGAGCTGGGCGAAGCGCGACCGGATCGGCCAGGCCGACCAGTTGATC 3255 Query 35638 GATACCACGGTCGGCAACATCGGGCCCGAAGATGGGGCGACGGTGACGCTCCAGGTCTAC 35697 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||| Sbjct 3256 GATACCACGGTCGGCAACATCGGACCCGAAGATGGGGCGACGGTTACGCTCCTGGT-TAC 3314 Query 35698 AGCGG 35702 ||||| Sbjct 3315 AGCGG 3319 >seq301 Length=948 Score = 830 bits (920), Expect = 0.0 Identities = 474/483 (98%), Gaps = 0/483 (0%) Strand=Plus/Plus Query 7106 CCGCAGACCCGCGAACAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 7165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3 CCGCAGACCCGCGAACAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 62 Query 7166 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATTGGCCAGATCACCGAGCGCTATTCG 7225 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 63 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 122 Query 7226 GAGCCGGCCGAAGACTTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGGGTCCAGTCCTGG 7285 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 123 GAGCCGGCCGAAGACCTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 182 Query 7286 TGCGAGGCCAACCGCGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACC 7345 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACA 242 Query 7346 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 7405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 302 Query 7406 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGCTTCATCCGCACCAAGGAAGAGGTG 7465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGCTTCATCCGCACCAAGGAAGAGGTG 362 Query 7466 AACAAGGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTTCCGGGGCTGACCGTG 7525 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct 363 AACAAGGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTGCCGGGGCTGACCCTG 422 Query 7526 AACTCCGGCATCGAAGACTTCGCCATCGTGCCTTTCGAAGCGGAGGTGCAGTGACATGGC 7585 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 423 AACACCGGCATCGAGGACTTCGCCATCGTGCCTTTCGAAGCGGAGGTGCAGTGACATGGC 482 Query 7586 CGA 7588 ||| Sbjct 483 CGA 485 Score = 241 bits (266), Expect = 3e-59 Identities = 234/300 (78%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 7949 GGAGGTG---TGACATGGCTGACACCATCGCTTTCTGCTGGGCCTCTGGCTTGATCCAGT 8005 ||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct 464 GGAGGTGCAGTGACATGGCCGACACCATCGCTTTCTGCTGGGCCTCTGGCCTGATCCAGT 523 Query 8006 TCGGTGACCAGGTGCCCGACGGTGCAATCGAGATCGCCCGTGGGGACGACCAGGTCGTTC 8065 ||||||||||||||||||| || || |||||||||||||||||||||||||||||||||| Sbjct 524 TCGGTGACCAGGTGCCCGAGGGCGCCATCGAGATCGCCCGTGGGGACGACCAGGTCGTTC 583 Query 8066 GCGAAATCATCGAAGTCACCTCGCGCCATGCCTACGACGGAAAGTCGCTCCTGGTGCCCG 8125 |||||| | ||| || ||||| || || |||||| |||||||||||| || | Sbjct 584 GCGAAAACCTCGTGACCAATTCGCGGCACGCTTACGACAACGTGTCGCTCCTGGTTCCGG 643 Query 8126 GCATACCCGAGGCAAAAAACCAGGCGGAAGGCATTGACGCCCTCGAAAGGTTCGTTCGCT 8185 || ||||||| || |||||| | || ||| ||||| || || | ||| | || Sbjct 644 GCGTACCCGAAGCGGCAAACCAAACCGAGGGCGGGGACGCACTGGAGTGCTTCATCCGTC 703 Query 8186 GGATCGCCTCGCACAACAGCGAGTCGTTCCAGGT---TTTCATGGGAGACGTGTGACATG 8242 ||||| | || |||||| | |||||||| || ||| ||||||||||||| Sbjct 704 TTCTCGCCAAGTACGACAGCGCCGCTTTCCAGGTCGCTTATGTGGAGGACGTGTGACATG 763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120639058968176