Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq5123 93.3 6e-14 >seq5123 Length=25762168 Score = 93.3 bits (102), Expect = 6e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || ||||||| || || || || || || || || ||| Sbjct 6599879 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTGGAGCCTTCC 6599820 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||||||||| || || || ||||| || || || |||||||| || Sbjct 6599819 GATACCATTGAAAACGTGAAGGCCAAGATTCAGGATAAGGAGGGAATTCCTCCAGATCAG 6599760 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | |||||| ||||| ||||||||||| ||| | ||| | || || ||||| Sbjct 6599759 CAGCGTCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGACGCACTCTTTCTGACTATAAC 6599700 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 ||| || ||| |||| ||||| || || Sbjct 6599699 ATACAGAAGGAGTCGACCCTTCACTTGGT 6599671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731825123598400