Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5123 84.2 2e-11 seq5124 82.4 6e-11 >seq5123 Length=25762168 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 105081 GGACTGCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCC 105140 || |||||||| || ||||| ||||||||||| || | || ||||||||||| ||| || Sbjct 11112069 GGTCTGCACGGATTCCACGTGCACGAGTTCGGAGACAACACCAACGGCTGCATGTCGTCC 11112010 Query 105141 GGCGAGCACTTCAACCCTACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAA-AGGCA 105199 || ||||||||| || || | | ||||||||||| | || || |||| | || Sbjct 11112009 GGACCGCACTTCAATCCGCATGGCAAGGAGCACGGCGCTCCCGTCGACG-AGAACCGTCA 11111951 Query 105200 CGTCGGCGACCTGGGCAA 105217 | | ||||| ||||||| Sbjct 11111950 CCTGGGCGATTTGGGCAA 11111933 >seq5124 Length=26641161 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || || ||||| | || ||||| ||||| ||| | || |||| || Sbjct 4301492 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCT 4301551 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| ||||| || ||| | ||| |||||| Sbjct 4301552 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCAG 4301611 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||||||||||| || || | ||||||||| Sbjct 4301612 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCCGACTACAAC 4301671 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || | ||| ||||| Sbjct 4301672 ATCCAGAAGGAGTCGACCCTCCACTTGGTG 4301701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398851890642436