Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_023700.1 Length=34553 Score E Sequences producing significant alignments: (Bits) Value seq3473 2143 0.0 seq301 854 0.0 >seq3473 Length=3319 Score = 2143 bits (2376), Expect = 0.0 Identities = 1340/1441 (93%), Gaps = 0/1441 (0%) Strand=Plus/Plus Query 27912 CCGGCCAGGCTTCGCCGCCGCTGGGTTTTGCCGCCCTGGAGGAACGCACCTGGACGGTCA 27971 |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 1 CCGGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAGGAACGCACTTGGACCGTCA 60 Query 27972 GCATTGGCACCGACGGCCCGCCCGTAGTCAATGCCCGAATCATCTGGAGGCTCCAGGGCG 28031 |||||||||| |||||||||||||| |||||||| || ||| |||||| ||||||||||| Sbjct 61 GCATTGGCACGGACGGCCCGCCCGTCGTCAATGCGCGGATCGTCTGGACGCTCCAGGGCG 120 Query 28032 AGCCGGACCTGGCCCTGGTCATCACTGGCAATCGCATCATCGCCTGGACGTTCGCGCCGG 28091 |||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 121 AGCCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCCTGGACCTTCGCGCCGG 180 Query 28092 ACTGGGGCGACAGCATCGTCGAACGCCTGAGCGCATCGACAAATATCCTGCAAAGCGAAT 28151 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 181 ACTGGGGCGACAGCATCGTCGAGCGCCTGAGCGCCTCGACAAATATCCTGCAAAGCGAAT 240 Query 28152 CGGCCGTGACCCAGCGCCGAGCCATGCGCCTGGCGCCGCGCCGAGAGTTCGAAGCGAACA 28211 | ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| Sbjct 241 CAGCCGTGACCCAGCGCCGGGCTATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAACA 300 Query 28212 TGTACGCGGTGGATCGCGAGCGGCAGTTGCTGGACATGACGCTGTTCGGCTGGGGTGCGC 28271 |||||||||| || |||||||||||| | ||||||||||||||||| |||||||| |||| Sbjct 301 TGTACGCGGTAGACCGCGAGCGGCAGCTCCTGGACATGACGCTGTTTGGCTGGGGCGCGC 360 Query 28272 GCATTTGGGCGCTGCCGATCTGGCCTGATATCCAGCTGCTCCACCAGCCGCTGGCGGCCG 28331 | ||||||||||||||||| |||||||||||||| |||||||| | ||||||||||||| Sbjct 361 GAATTTGGGCGCTGCCGATTTGGCCTGATATCCAACTGCTCCAAGAACCGCTGGCGGCCG 420 Query 28332 GGTCGCTGAGCATTCCGTGCGACACGGCCGGCCTCGACTTCCGCGACGGCGGTCTGGCGA 28391 | ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 421 GCTCGCTGAACATTCCGTGCGACACGGTCGGCCTCGACTTCCGCGACGGCGGTCTGGCGA 480 Query 28392 TGCTGCGCGGCGAGGACGCTTTTACTTACGAGGTCGTCGAGGTCAAGACGGTGACCGCCA 28451 ||||||||||||||||||| || || || || ||||||||||||||| | ||||||||| Sbjct 481 TGCTGCGCGGCGAGGACGCCTTCACCTATGAAGTCGTCGAGGTCAAGGCAGTGACCGCCG 540 Query 28452 GCGGCCTGGACCTGGTCCGGCCCGTCCAGGCCGCGTGGGGAACTGGCTCGCGACTGTACC 28511 |||||||||||||||||| |||||||||||| | |||| |||||||||||||||||||| Sbjct 541 CCGGCCTGGACCTGGTCCGCCCCGTCCAGGCCACCTGGGTAACTGGCTCGCGACTGTACC 600 Query 28512 CAGTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATACCGCGC 28571 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 CGGTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATACCGCGC 660 Query 28572 AGTCTGCGCGGGTGTCGTTCCTTGTGATGGAACCCAGCAGTTGGCCCGAGGTGATGCCGG 28631 |||||||||||||||||||||| | ||||| |||||| ||||||||||| ||||||| Sbjct 661 AGTCTGCGCGGGTGTCGTTCCTGATAATGGAGCCCAGCGCCTGGCCCGAGGTAATGCCGG 720 Query 28632 CGACGATGTACCGGGGGCGTCCTGTCCTGGAACAGCGCCCCGACGAAAGCGAAGACCTGA 28691 |||||| ||| ||||||| || || ||||| |||||||| ||||||||||||||||| | Sbjct 721 CGACGACCTACAGGGGGCGGCCAGTGCTGGAGCAGCGCCCGGACGAAAGCGAAGACCTCA 780 Query 28692 CGTCGAGCTATCAGCGCCTGCTGTCCACCCTGGATAACGGCAGCGCCATTCCCCGCGTGA 28751 | || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 781 CCTCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCGCGTGA 840 Query 28752 CCGACGTCGCCGGCATGGCGCTGCCCGTCATCGGTCATCGCTGGATCGGCATGGGCCGAG 28811 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 CCGACGTCGCCGGGATGGCGCTGCCCGTCATCGGTCATCGCTGGATCGGCATGGGCCGAG 900 Query 28812 CCGAACGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTACGCGGCCAGCAGAAGCCGCTGT 28871 |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct 901 CCGAGCGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTGCGAGGCCAGCAGAAGCCGCTAT 960 Query 28872 GGGTGCCGACCCACGCCGACGACCTGACCCTGGTCGCCACCGTCTCGCAGCTGTCCACCG 28931 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 961 GGGTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGTCCACTG 1020 Query 28932 CGCTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAACGGCCGGCCGGGCCGTCGCG 28991 |||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||| Sbjct 1021 CGCTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAATGGGCGACCGGGTCGTCGCG 1080 Query 28992 ATATCCGCATCGAGCTATACGACGGCACGGTCTATCACCGCCGCATCCTCACCAGCACAG 29051 |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| | Sbjct 1081 ATATCCGCATCGAGCTGTACGACGGCACCGTCTATCACCGCCGCATTCTCACCAGCACCG 1140 Query 29052 AGCTGGACGCCGACACCGAGCGCTTGGCCATCGATGCCGCCCTGGGCCGGCTGGTCGAGC 29111 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 1141 AGCTGGACGCCGACACCGAGCGCTTGGCCATCGACGCCGCCCTGGGCCGCCTGGTCGAGC 1200 Query 29112 CTGGTGACGTGGCGCGCATTTGTTTCATGGCGCTCTGTAGCGCCGCCACCGACGTGGTCG 29171 | || || |||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct 1201 CGACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCGCCAGCGACGTGGTCG 1260 Query 29172 AGATCGAGCACGTCACTGATAGCGAGGGCGTAGCAACTGCCGCCCTGACGTTCAAAGGGG 29231 |||| ||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct 1261 AGATTGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCCGCGCTGACATTCAAAGGGG 1320 Query 29232 TTCGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGG 29291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1321 TTCGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGG 1380 Query 29292 CTGTACCAGTTCAGCCGTGGAGCCATCCGCTGGAGCTACAACAGCAGCGACCGGGACATC 29351 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 1381 CTGTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGCAGCGACCGGGACATC 1440 Query 29352 A 29352 | Sbjct 1441 A 1441 Score = 1133 bits (1256), Expect = 0.0 Identities = 726/785 (92%), Gaps = 7/785 (1%) Strand=Plus/Plus Query 31730 GACCGGACGCCTCGGGCGGTCACCGTGCGGCGTCTGATCGAGGCGCCATATCGCGAACTG 31789 |||||||||||||||||| |||| ||||| || ||||||||||| || |||||||||| Sbjct 2536 GACCGGACGCCTCGGGCGATCACTGTGCGCCGCCTGATCGAGGCACCCTATCGCGAACCT 2595 Query 31790 GCC---GGCGTGATCGATCC-GGCGAATCTCCAGCTCCTGGACGTGTCCGCCTCGTATCT 31845 ||| |||||||||||||| ||| ||||||||||||||||||||| ||| || | || Sbjct 2596 GCCCCGGGCGTGATCGATCCCGGCAAATCTCCAGCTCCTGGACGTGAGCGCGTCCTTACT 2655 Query 31846 TG-CCGCCTTGGCC-GAGGCGCCGACGAGCCTGTCGCAGAGCTACACCTTGACCGACCGC 31903 || |||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 2656 TGGCCGCGCTGGCCCGAGGCGCCGACCAGCCTGTCGCAGAGCTACACACTGACCGACCGC 2715 Query 31904 GTCGGCAGTTCTGGCGCGTTCGTTGATCGCGGAACCGGCGACTGGTGCCCGACCGGACTA 31963 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2716 GTCGGCAGCTCTGGCGCGTTCGTTGATCGCGGAACCGGCGACTGGTGCCCGACCGGACTA 2775 Query 31964 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGCCCGAACGTCGTCACGTTGACGAACGCCACC 32023 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 2776 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGTCCGAACGTCGTCACGTTGACGAACGCCAGC 2835 Query 32024 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCTGTGGTGGACGACGAGATAGTCCGGGTC 32083 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 2836 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCAGTCGTGGACGACGAGATAGTCCGGGTC 2895 Query 32084 GATGCCGTCAACTATGCCAGTGGCACCGTCACCCTGGCGCGCGGCTGCGCCGATACCGTG 32143 ||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct 2896 GATGCGGTCAACTACGCCAGCGGCACGGTCACCCTCGCGCGCGGCTGCGCCGATACCGTA 2955 Query 32144 CCGGCCAAGCACTTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCGGTGGAC 32203 ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2956 CCGGCCAAGCATCTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCTGTGGAC 3015 Query 32204 GAGACGGTATACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACCAACACCAGCGAG 32263 || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3016 GAAACGGTCTACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACGAACACCAGCGAG 3075 Query 32264 GGCCAGCTCGCCCCGGCGCTGGCCGCCACCGACAGCCTCACTCTGACCGGGCGCCAGGGC 32323 ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 3076 GGCCAACTGGCCCCGGCGCTGGCCGCCACCGACAGCCTCACCCTGACCGGGCGCCAAGGT 3135 Query 32324 AAGCCGTATCCGCCCGGCCAGTTCCGAATCAACGGCAGCGCGTACCCGACGAAGGTCTAC 32383 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct 3136 AAGCCGTATCCGCCCGGCCAGTTCCGCATCAACGGCAGCGCGTACCCAACGAAAGTCTAC 3195 Query 32384 GGAGCGCTGTCGGTGAGCTGGGCGATGCGCGACCGCATCGGCCAGGCCGACCAGTTGATC 32443 || |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 3196 GGGGCGCTGTCGGTGAGCTGGGCGAAGCGCGACCGGATCGGCCAGGCCGACCAGTTGATC 3255 Query 32444 GATACCACTGTCGGCAACATCGGGCCCGAAGATGGGGCGACGGTGACGCTCCAGGTCTAC 32503 |||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| ||| Sbjct 3256 GATACCACGGTCGGCAACATCGGACCCGAAGATGGGGCGACGGTTACGCTCCTGGT-TAC 3314 Query 32504 AGCGG 32508 ||||| Sbjct 3315 AGCGG 3319 >seq301 Length=948 Score = 854 bits (946), Expect = 0.0 Identities = 479/483 (99%), Gaps = 0/483 (0%) Strand=Plus/Plus Query 4267 CCGCAGACCCGCGAGCAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 4326 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3 CCGCAGACCCGCGAACAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 62 Query 4327 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 4386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 122 Query 4387 GAGCCGGCCGAAGACCTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 4446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 GAGCCGGCCGAAGACCTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 182 Query 4447 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACG 4506 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACA 242 Query 4507 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 4566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 302 Query 4567 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGCTTCATCCGCACCAAGGAAGAGGTG 4626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGCTTCATCCGCACCAAGGAAGAGGTG 362 Query 4627 AACAAGGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTGCCGGGGCTGACCCTG 4686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 363 AACAAGGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTGCCGGGGCTGACCCTG 422 Query 4687 AACACGGGCATCGAAGACTTCGCCATCGTGCCTTTCGAAGCGGAGGTGCAGTGACATGGC 4746 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 423 AACACCGGCATCGAGGACTTCGCCATCGTGCCTTTCGAAGCGGAGGTGCAGTGACATGGC 482 Query 4747 CGA 4749 ||| Sbjct 483 CGA 485 Score = 342 bits (378), Expect = 1e-89 Identities = 197/201 (98%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 5109 AGGAGGTGTGACATGGCCCGCAACCGCGCGCAACAGCTGTGCATCGTCACCTTGGACTAT 5168 |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 749 AGGACGTGTGACATGGCACGCAACCGCGCGCAACAGCTGTGCATCG-CACCTTGGACTAT 807 Query 5169 CAGCGCTTCCTGTTACCCCAGGCTGATGCACTCAAGCTGATAGACATCATGAGTCGAGCC 5228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 808 CAGCGCTTCCTGTTACCCCAGGCTGATGCACTCAAGCTGATAGACATCATGAGTCGAGCC 867 Query 5229 GCAGAGGTTCAGGCCGACTACGCCTCTGGAGCTGGGTTCAAGTACACCGTCGGCGAAGTG 5288 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 868 GCAGAGGTTCAGGCCGACTACGCCTCTGGAGCTGGATTCAAGTACACCGTCGGCGAAGTG 927 Query 5289 CCGGAAGTCGAGTTGACGATA 5309 ||||||||||||||||||||| Sbjct 928 CCGGAAGTCGAGTTGACGATA 948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110441279515320