Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq5124 98.7 2e-15 >seq5124 Length=26641161 Score = 98.7 bits (108), Expect = 2e-15 Identities = 187/273 (68%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 183014 ATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTT 183073 ||||| || ||||| | | ||| | ||| || || | || ||||||||||| | | Sbjct 18900185 ATGACGACCTGTGGAACTCGGCGCAACTGCAGTTGGTGCGCGAGGGAAAAATGCACGGCT 18900126 Query 183074 TTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTT 183133 |||| || ||||||||||| |||||||| || |||||||| || || || || | Sbjct 18900125 TTTTGCGCATGTACTGGGCCAAAAAGATTCTGGAATGGACTGCCACCCCCGAGCGGGCGT 18900066 Query 183134 TGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACG-GATCCTAACGGA 183192 || || |||| ||||| | ||||| || || || ||| ||||| ||||| Sbjct 18900065 TGGAGTACGCGATCTTGCTGAACGACAAGTATAGTCTGGATGG-ACGCGATCCCAACGGC 18900007 Query 183193 TACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCT 183252 || || || || |||||||| ||| |||| | || || | | |||||| || | || Sbjct 18900006 TATGTGGGCTGCATGTGGTCAATTGGCGGCGTCCATGACATGGGGTGGAAGGAGCGGGCT 18899947 Query 183253 ATATTTGGAAAGATAAGATATATGAATTATGAG 183285 || || || ||| | | || ||||| ||| || Sbjct 18899946 ATTTTCGGCAAGGTTCGGTACATGAACTATCAG 18899914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903353336512640