Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq5124 86.0 6e-12 >seq5124 Length=26641161 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697 ||||||||| || || | |||||| || || || || | |||||||||||| || || || Sbjct 10932368 CACGGTGAACTGAATGGCATTCGCAGCTGGCTTTGTGCGCAGATAGTACATTCCGGTTTT 10932427 Query 136698 TAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757 | ||| | |||||| ||| ||||| || | || || |||| | || || || Sbjct 10932428 AAGACCAGCTTTCCAGGAGTAAAAGTGTATGGAGGTCAGTTTTCCATAGTTGGGCTCTGC 10932487 Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817 ||| || || | ||| || |||||||| ||| | | || ||||| |||||||| || Sbjct 10932488 CACATGAATGTTGAACGACTGACTCTGATCTATGAACGCACCACGGTCGGCGGCCATTTT 10932547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445065891703680