Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5124 279 6e-70 >seq5124 Length=26641161 Score = 279 bits (308), Expect = 6e-70 Identities = 466/668 (70%), Gaps = 7/668 (1%) Strand=Plus/Plus Query 146841 GAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTT 146900 ||| || || ||||||| |||| | | | || || |||||||| |||||||| || | Sbjct 3014221 GAAGTCATCGATGTCCTGCACCTGACGCTTTATGTTCAGCTTGGGAAAGGGTCGCGGTGT 3014280 Query 146901 CCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAG 146960 || |||||| ||||| ||||| || ||||| ||||||||||||| ||| |||| Sbjct 3014281 CCGCTTCAGCTGCTCCTTCAGCGGCTCGACATGGTTCAGGTAGACGTGCGTGTCGCCCAT 3014340 Query 146961 GGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAG 147020 |||||| |||||||| |||||||| || || ||||| ||||| | ||||||||||||||| Sbjct 3014341 GGTGTGGACAAAGTCGCCCGGCTTCAGACCTGTCACATGGGCGATCATGTAGGTGAGCAG 3014400 Query 147021 CGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAG 147080 | |||| ||| || |||||||| || |||||||||||||| | ||||||||| || Sbjct 3014401 GGCGTAGGAGGCGATATTGAAGGGTACGCCCAGGCCCATGTCGGCACTCCTCTGGTAGAG 3014460 Query 147081 CTGGCACGAGAGCTCCCCG---TCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGG 147137 ||||||||| ||||| ||| || ||| ||||||| ||| ||| ||||| || Sbjct 3014461 CTGGCACGATAGCTCACCGCGCGTGGAGACGAAAAACTGTGCCAGACAGTGACACGGTGG 3014520 Query 147138 CAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCT- 147196 ||| |||| |||| || | || ||||| ||||| | | | |||| | ||| Sbjct 3014521 CAGGACCATCTTTGGCATATCAACAGGATTCCAAGCCGACAAGATGATGCGCC-GATCTG 3014579 Query 147197 CGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGT 147256 ||| || |||| || || || |||| | |||||| || | |||| ||| | || Sbjct 3014580 AGGGATTATTCTTGATAGTGTCAATCACCCGACGCAGCTGATCGATTCCCTTGCCGCTGT 3014639 Query 147257 AGTTTGTC-CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACT 147315 || | ||| ||||| ||||| ||||| ||||| | ||||||||||||||| || Sbjct 3014640 AG-TCGTCGTCGCAGGTGGCGTACTCCGCCCCGAAGTGTCGCCACTGGAAGCCGTAGACC 3014698 Query 147316 GGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGAC 147375 || ||||| ||||| | | || || ||| | | || ||||| | Sbjct 3014699 GGGCCCAGATCGCCAACGGAACGCTCCGTTAACCCCAGGCTGTCCAGGAACTCTCTGCTG 3014758 Query 147376 CCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCC 147435 | || ||||||||||| ||| ||| || ||| ||| | |||||| |||| Sbjct 3014759 CTGTTCCCGTCCCAGATGTGCACGTTCTTCGCCTGCAGCAACTTGGCGTCCGTCTTGCCC 3014818 Query 147436 CGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGC 147495 | |||||| ||||||||||| || | | | || || | ||||||||||||| Sbjct 3014819 GCCACGAACCACAGCAGCTCCTCGGCTACTGCGCGGAAGAACACACGCTTGGTGGTCAGC 3014878 Query 147496 AGGGGGAA 147503 || || || Sbjct 3014879 AGTGGAAA 3014886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583450627593600