Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_026601.1 Length=37238 Score E Sequences producing significant alignments: (Bits) Value seq3473 2307 0.0 seq301 320 4e-83 >seq3473 Length=3319 Score = 2307 bits (2558), Expect = 0.0 Identities = 1375/1439 (96%), Gaps = 0/1439 (0%) Strand=Plus/Plus Query 30602 GGCCAGGCGTCGCCGCCGCTGGGTTTTGCTGCCCTGGAGGAACGCACCTGGACGGTCAGC 30661 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct 3 GGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAGGAACGCACTTGGACCGTCAGC 62 Query 30662 ATCGGCACCGACGGCCCGCCCGTGGTCAATGCACGGATCATCTGGAGGCTCTTGGGCGAG 30721 || ||||| |||||||||||||| |||||||| |||||| |||||| |||| ||||||| Sbjct 63 ATTGGCACGGACGGCCCGCCCGTCGTCAATGCGCGGATCGTCTGGACGCTCCAGGGCGAG 122 Query 30722 CCGGACCTGGTCCTGGTCATCACCGGCAATCGGATCATCGCCTGGACGTTCGCCCCGGAC 30781 |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct 123 CCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCCTGGACCTTCGCGCCGGAC 182 Query 30782 TGGGGCGACAGCATCGTCGAGCGCCTGAGCGCCTCGACAAATATCCTGCAAAGCGAATCA 30841 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 TGGGGCGACAGCATCGTCGAGCGCCTGAGCGCCTCGACAAATATCCTGCAAAGCGAATCA 242 Query 30842 GTCGTGACCCAGCGCCGGGCTATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAACATG 30901 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 GCCGTGACCCAGCGCCGGGCTATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAACATG 302 Query 30902 TACGCGGTGGACCGCGAGCGGCAGCTACTGGACATGACGCTGTTTGGCTGGGGCGCGCGC 30961 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 303 TACGCGGTAGACCGCGAGCGGCAGCTCCTGGACATGACGCTGTTTGGCTGGGGCGCGCGA 362 Query 30962 GTTTGGGCGCTGCCGATCTGGCCTGATATCCAACTGCTCCAGGAACCGCTGGCGGCCGGC 31021 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 363 ATTTGGGCGCTGCCGATTTGGCCTGATATCCAACTGCTCCAAGAACCGCTGGCGGCCGGC 422 Query 31022 TCGCTGAACATTCCGTGCGACACGGCCGGCCTCGACTTCCGCGACGGCGGCCTGGCGATG 31081 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 423 TCGCTGAACATTCCGTGCGACACGGTCGGCCTCGACTTCCGCGACGGCGGTCTGGCGATG 482 Query 31082 CTGCGCGGCGAGGACGCTTTTACTTATGAGGTCGTCGAGGTCAAGACGGTGACCGCCAGC 31141 ||||||||||||||||| || || ||||| ||||||||||||||| | ||||||||| | Sbjct 483 CTGCGCGGCGAGGACGCCTTCACCTATGAAGTCGTCGAGGTCAAGGCAGTGACCGCCGCC 542 Query 31142 GGCCTGGACCTGGTTCGGCCCGTCCAGGCCGCCTGGGGAACTGGCTCGCGACTGTACCCG 31201 |||||||||||||| || |||||||||||| |||||| |||||||||||||||||||||| Sbjct 543 GGCCTGGACCTGGTCCGCCCCGTCCAGGCCACCTGGGTAACTGGCTCGCGACTGTACCCG 602 Query 31202 GTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATACCGCGCAG 31261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 603 GTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATACCGCGCAG 662 Query 31262 TCTGCGCGGGTGTCGTTCCTGATAATGGAGCCCAGCGCCTGGCCCGAGGTAATGCCGGCG 31321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 663 TCTGCGCGGGTGTCGTTCCTGATAATGGAGCCCAGCGCCTGGCCCGAGGTAATGCCGGCG 722 Query 31322 ACGACCTACAGGGGTCGGCCAGTGCTGGAGCAGCGCCCGGACGAAAGCGAAGACCTGACG 31381 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 723 ACGACCTACAGGGGGCGGCCAGTGCTGGAGCAGCGCCCGGACGAAAGCGAAGACCTCACC 782 Query 31382 TCGAGCTATCAGCGCCTGCTGTCCACCCTCGACAACGGCAGCGCGATTCCCCGCGTGACC 31441 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 783 TCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCGCGTGACC 842 Query 31442 GACGTCGCCGGCATGGCGCTGCCCGTCATCGGCCATCGCTGGATCGGCATGGGCCGAGCC 31501 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 843 GACGTCGCCGGGATGGCGCTGCCCGTCATCGGTCATCGCTGGATCGGCATGGGCCGAGCC 902 Query 31502 GAGCGGTCGGCGTTCCGTAGCCTGGTCTATGCGCTGCGCGGCCAGCAGAAGCCGCTATGG 31561 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 903 GAGCGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTGCGAGGCCAGCAGAAGCCGCTATGG 962 Query 31562 GTGCCAACCCACGCCGACGACCTGACCCTGGTCGCCACCGTCTCGCAACTGGCGACCGCG 31621 ||||| ||||||||||||||||||||||| ||||||||||||||||| ||| | || ||| Sbjct 963 GTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGTCCACTGCG 1022 Query 31622 CTGGATGTGCGCAATATCGGCTATGCCCGTTTCGCGAATGGTCGGCCGGGCCGTCGCGAC 31681 ||||| ||||||||||||||||||||||||||||| ||||| || ||||| |||||||| Sbjct 1023 CTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAATGGGCGACCGGGTCGTCGCGAT 1082 Query 31682 ATCCGTATCGAGCTGTACGACGGCACGGTCTATCACCGCCGCATCCTCACCAGCACCGAG 31741 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 1083 ATCCGCATCGAGCTGTACGACGGCACCGTCTATCACCGCCGCATTCTCACCAGCACCGAG 1142 Query 31742 CTGGACGCCGACACCGAGCGTTTGGCCATCGACGCCGCCCTGGGCCGCCTGGTCGAGCCG 31801 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1143 CTGGACGCCGACACCGAGCGCTTGGCCATCGACGCCGCCCTGGGCCGCCTGGTCGAGCCG 1202 Query 31802 ACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCGCCACCGACGTGGTCGAG 31861 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1203 ACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCGCCAGCGACGTGGTCGAG 1262 Query 31862 ATAGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCCGCGCTGACGTTCAAAGGGGTT 31921 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1263 ATTGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCCGCGCTGACATTCAAAGGGGTT 1322 Query 31922 CGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTTGCGGATGGGCAGCCGGTGCGGCT 31981 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1323 CGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGGCT 1382 Query 31982 GTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGCAGCGACCGGGACATCA 32040 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1383 GTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGCAGCGACCGGGACATCA 1441 Score = 1214 bits (1346), Expect = 0.0 Identities = 744/785 (95%), Gaps = 7/785 (1%) Strand=Plus/Plus Query 34418 GACCGGACGCCTCGGGCGATCACTGTGCGCCGCCTGATGGAAGCACCCTATCGCGAACTG 34477 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 2536 GACCGGACGCCTCGGGCGATCACTGTGCGCCGCCTGATCGAGGCACCCTATCGCGAACCT 2595 Query 34478 GCC---GGGGTGATCGATCC-GGCGAATCTCCAGCTCCTGGACGTGAGCGCGTCCT-ACT 34532 ||| || ||||||||||| ||| ||||||||||||||||||||||||||||||| ||| Sbjct 2596 GCCCCGGGCGTGATCGATCCCGGCAAATCTCCAGCTCCTGGACGTGAGCGCGTCCTTACT 2655 Query 34533 TGGCCGCGCTGGCC-GAGGCGCCGACCAGCCTGTCGCAGAGCTACACACTGACCGACCGC 34591 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2656 TGGCCGCGCTGGCCCGAGGCGCCGACCAGCCTGTCGCAGAGCTACACACTGACCGACCGC 2715 Query 34592 GTCGGCAGCTCTGGCGCGTTCGTTGATCGCGGAAGCGGCGACTGGTGCCCGACCGGCCTA 34651 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 2716 GTCGGCAGCTCTGGCGCGTTCGTTGATCGCGGAACCGGCGACTGGTGCCCGACCGGACTA 2775 Query 34652 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGCCCGAGCGTAGTCACGCTGACCAACGCCAGC 34711 ||||||||||||||||||||||||||||| |||| ||| |||||| |||| ||||||||| Sbjct 2776 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGTCCGAACGTCGTCACGTTGACGAACGCCAGC 2835 Query 34712 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCAGTCGTGGACGACGAGATAGTCCGGGTC 34771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2836 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCAGTCGTGGACGACGAGATAGTCCGGGTC 2895 Query 34772 GATGCGGTCAACTACGCGAGCGGCACAGTCACCCTGGCGCGCGGCTGCGCCGATACCGTG 34831 ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct 2896 GATGCGGTCAACTACGCCAGCGGCACGGTCACCCTCGCGCGCGGCTGCGCCGATACCGTA 2955 Query 34832 CCGGCCAAGCACTTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCGGTGGAC 34891 ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2956 CCGGCCAAGCATCTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCTGTGGAC 3015 Query 34892 GAAACGGTATACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACGAACACCAGCGAG 34951 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3016 GAAACGGTCTACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACGAACACCAGCGAG 3075 Query 34952 GGCCAGCTGGCCCCGGCGCTGGCCGCCACTGACAGCCTCACGCTGACGGGGCGCCAGGGT 35011 ||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct 3076 GGCCAACTGGCCCCGGCGCTGGCCGCCACCGACAGCCTCACCCTGACCGGGCGCCAAGGT 3135 Query 35012 AAGCCGTATCCGCCCGGCCAGTTCCGCATCAACGGCAGCGCGTACCCAACGAAAGTCTAC 35071 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3136 AAGCCGTATCCGCCCGGCCAGTTCCGCATCAACGGCAGCGCGTACCCAACGAAAGTCTAC 3195 Query 35072 GGGACGCTGTCGGTGAGCTGGGCGAAGCGCGACCGCATCGGCCAAGCCGACCAGTTGATC 35131 ||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 3196 GGGGCGCTGTCGGTGAGCTGGGCGAAGCGCGACCGGATCGGCCAGGCCGACCAGTTGATC 3255 Query 35132 GATACCACGGTCGGCAACATCGGCCCGGAAGCTGGGGCGACGGTGACGCTCCAGGTCTAC 35191 ||||||||||||||||||||||| || |||| |||||||||||| ||||||| ||| ||| Sbjct 3256 GATACCACGGTCGGCAACATCGGACCCGAAGATGGGGCGACGGTTACGCTCCTGGT-TAC 3314 Query 35192 AGCGG 35196 ||||| Sbjct 3315 AGCGG 3319 >seq301 Length=948 Score = 320 bits (354), Expect = 4e-83 Identities = 196/207 (95%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 8230 ATATGGCGGGGGTGTGATATGGCCCGCAACCGCGCGCAACAGCTGTGCATCGTCACCTTG 8289 || ||| || |||||| ||||| |||||||||||||||||||||||||||| ||||||| Sbjct 743 ATGTGGAGGACGTGTGACATGGCACGCAACCGCGCGCAACAGCTGTGCATCG-CACCTTG 801 Query 8290 GACTATCAGCGTTTCCTGTTACCCCAGGCTGATGCACTCAAGCTGATAGACATCATGAGT 8349 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 802 GACTATCAGCGCTTCCTGTTACCCCAGGCTGATGCACTCAAGCTGATAGACATCATGAGT 861 Query 8350 CGAGCCGCAGAGGTTCAGGCCGACTACGCCTCTGGAGCTGGGTTCAAGTACACCGTCGGC 8409 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 862 CGAGCCGCAGAGGTTCAGGCCGACTACGCCTCTGGAGCTGGATTCAAGTACACCGTCGGC 921 Query 8410 GAAGCGCCGGAAGTCGAGTTGACGGTA 8436 |||| ||||||||||||||||||| || Sbjct 922 GAAGTGCCGGAAGTCGAGTTGACGATA 948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119032756713600