Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_027384.1 Length=37359 Score E Sequences producing significant alignments: (Bits) Value seq3473 2210 0.0 seq301 848 0.0 >seq3473 Length=3319 Score = 2210 bits (2450), Expect = 0.0 Identities = 1350/1441 (94%), Gaps = 0/1441 (0%) Strand=Plus/Plus Query 30735 CCGGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAAGAACGCACTTGGACGGTCA 30794 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 1 CCGGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAGGAACGCACTTGGACCGTCA 60 Query 30795 GCATTGGCACGGACGGCCCGCCCGTCGTCAATGCGCGGATCGTTTGGAGGCTCCAGGGCG 30854 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 61 GCATTGGCACGGACGGCCCGCCCGTCGTCAATGCGCGGATCGTCTGGACGCTCCAGGGCG 120 Query 30855 AGCCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCTTGGACGTTCGCGCCGG 30914 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 121 AGCCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCCTGGACCTTCGCGCCGG 180 Query 30915 ACTGGGGCGACAGCATCGTCGAGCGCCTGAGCGCCTCGACAAATATCCTGCAAAGCGAAT 30974 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ACTGGGGCGACAGCATCGTCGAGCGCCTGAGCGCCTCGACAAATATCCTGCAAAGCGAAT 240 Query 30975 CAGCCGTGACCCAGCGCCGAGCCATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAACA 31034 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 241 CAGCCGTGACCCAGCGCCGGGCTATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAACA 300 Query 31035 TGTACGCGGTGGACCGCGAGCGGCAGCTGCTGGACATGACGCTGTTCGGCTGGGGCGCGC 31094 |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 301 TGTACGCGGTAGACCGCGAGCGGCAGCTCCTGGACATGACGCTGTTTGGCTGGGGCGCGC 360 Query 31095 GCATTTGGGCGCTGCCTATCTGGCCTGATATCCAGCTGCTCCAGGAACCGCTGGCGGCCG 31154 | |||||||||||||| || |||||||||||||| |||||||| |||||||||||||||| Sbjct 361 GAATTTGGGCGCTGCCGATTTGGCCTGATATCCAACTGCTCCAAGAACCGCTGGCGGCCG 420 Query 31155 GCTCGCTGAACATTCCGTGCGGCACGGCCGGCCTCGACTTCCGCGACGGCGGCCTGGCGA 31214 ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| Sbjct 421 GCTCGCTGAACATTCCGTGCGACACGGTCGGCCTCGACTTCCGCGACGGCGGTCTGGCGA 480 Query 31215 TGCTGCGCGGCGAGGACGCTTTTACTTATGAGGTCGTCGAGGTCAAGACGGTGACCGCCA 31274 ||||||||||||||||||| || || ||||| ||||||||||||||| | ||||||||| Sbjct 481 TGCTGCGCGGCGAGGACGCCTTCACCTATGAAGTCGTCGAGGTCAAGGCAGTGACCGCCG 540 Query 31275 GCGGCCTGGACCTGGTTCGGCCCGTCCAGGCCGCCTGGGGAACTGGCTCGCGACTGTACC 31334 ||||||||||||||| || |||||||||||| |||||| |||||||||||||||||||| Sbjct 541 CCGGCCTGGACCTGGTCCGCCCCGTCCAGGCCACCTGGGTAACTGGCTCGCGACTGTACC 600 Query 31335 CGGTGCGCACCGCGCAGCTGACCGAGCAGCCCACGCTGACCCGGCTGACCGATACCGTGC 31394 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 601 CGGTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATACCGCGC 660 Query 31395 AGTCTGCGCGGGTGTCGTTCCTTGTGATGGAACCCAGCAGTTGGCCCGAGGTGATGCCGG 31454 |||||||||||||||||||||| | ||||| |||||| ||||||||||| ||||||| Sbjct 661 AGTCTGCGCGGGTGTCGTTCCTGATAATGGAGCCCAGCGCCTGGCCCGAGGTAATGCCGG 720 Query 31455 CGACGATGTACCGGGGGCGTCCTGTCCTGGAACAGCGCCCGGACGAAAGCGAAGACCTGA 31514 |||||| ||| ||||||| || || ||||| |||||||||||||||||||||||||| | Sbjct 721 CGACGACCTACAGGGGGCGGCCAGTGCTGGAGCAGCGCCCGGACGAAAGCGAAGACCTCA 780 Query 31515 CGTCGAGCTATCAGCGCCTGCTGTCCACCCTGGATAACGGCAGCGCCATTCCCCGCGTGA 31574 | || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 781 CCTCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCGCGTGA 840 Query 31575 CCGACGTCGCCGGCATGGCGCTGCCCGTCATCGGCCATCGGTGGATCGGCATGGGCCGAG 31634 ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 841 CCGACGTCGCCGGGATGGCGCTGCCCGTCATCGGTCATCGCTGGATCGGCATGGGCCGAG 900 Query 31635 CCGAACGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTACGCGGCCAGCAGAAGCCGCTGT 31694 |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct 901 CCGAGCGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTGCGAGGCCAGCAGAAGCCGCTAT 960 Query 31695 GGGTGCCGACCCACGCCGACGACCTGACCCTGGTCGCCACCGTCTCGCAGCTGTCCACCG 31754 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 961 GGGTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGTCCACTG 1020 Query 31755 CGCTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAATGGGCGACCGGGTCGTCGCG 31814 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 CGCTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAATGGGCGACCGGGTCGTCGCG 1080 Query 31815 ATATCCGCATCGAGCTGTACGACGGCACCGTCTATCACCGCCGCATTCTCACCANNNNNN 31874 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 ATATCCGCATCGAGCTGTACGACGGCACCGTCTATCACCGCCGCATTCTCACCAGCACCG 1140 Query 31875 NNNNNNNNNNNNNNNNNGAGCGCTTGGCCATCGACGCCGCCCTGGGCCGCCTGGTCGAGC 31934 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 AGCTGGACGCCGACACCGAGCGCTTGGCCATCGACGCCGCCCTGGGCCGCCTGGTCGAGC 1200 Query 31935 CGACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCGCCACCGACGTGGTCG 31994 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1201 CGACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCGCCAGCGACGTGGTCG 1260 Query 31995 AGATCGAGCACGTCACCGATAGCGAGGGCGTCGCAACTGCCGCCCTGACGTTCAAAGGGG 32054 |||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct 1261 AGATTGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCCGCGCTGACATTCAAAGGGG 1320 Query 32055 TTCGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTTGCGGATGGGCAGCCGGTGCGG 32114 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1321 TTCGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGG 1380 Query 32115 CTGTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGCAGCGACCGGGACATC 32174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1381 CTGTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGCAGCGACCGGGACATC 1440 Query 32175 A 32175 | Sbjct 1441 A 1441 Score = 1160 bits (1286), Expect = 0.0 Identities = 732/785 (93%), Gaps = 7/785 (1%) Strand=Plus/Plus Query 34553 GACCGGACGCCTCGGGCGATCACGGTGCGGCGTCTGATCGAGGCGCCATATCGTGAGCTG 34612 ||||||||||||||||||||||| ||||| || ||||||||||| || ||||| || | Sbjct 2536 GACCGGACGCCTCGGGCGATCACTGTGCGCCGCCTGATCGAGGCACCCTATCGCGAACCT 2595 Query 34613 GCC---GGGGTGATCGATCC-GGCGAATCTCCAGCTCCTGGACGTGAGCGCGTCCT-ACC 34667 ||| || ||||||||||| ||| ||||||||||||||||||||||||||||||| || Sbjct 2596 GCCCCGGGCGTGATCGATCCCGGCAAATCTCCAGCTCCTGGACGTGAGCGCGTCCTTACT 2655 Query 34668 TGGCCGCGCTGGCC-GAGGCGCCGACCAGCTTGTCGCAGAGCTACACCCTGACCGACCGC 34726 |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 2656 TGGCCGCGCTGGCCCGAGGCGCCGACCAGCCTGTCGCAGAGCTACACACTGACCGACCGC 2715 Query 34727 GTCGGCAGTTCGGGCGCGTTCGTTGATCGCGGAACCGGCGACTGGTGCCCGACCGGACTA 34786 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2716 GTCGGCAGCTCTGGCGCGTTCGTTGATCGCGGAACCGGCGACTGGTGCCCGACCGGACTA 2775 Query 34787 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGCCCGAGCGTCGTCACGCTGACGACATACAGC 34846 ||||||||||||||||||||||||||||| |||| |||||||||| |||||| |||| Sbjct 2776 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGTCCGAACGTCGTCACGTTGACGAACGCCAGC 2835 Query 34847 CGGCTGGAAGACGTCACTGTCGGCCAGGCCGCAGTCGTGGACGACGAGATAGTCCGGGTC 34906 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2836 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCAGTCGTGGACGACGAGATAGTCCGGGTC 2895 Query 34907 GATGCGGTCAACTACGCCAGCGGCACGGTCACCCTGGCGCGCGGCTGCGCCGATACCGTA 34966 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2896 GATGCGGTCAACTACGCCAGCGGCACGGTCACCCTCGCGCGCGGCTGCGCCGATACCGTA 2955 Query 34967 CCCGCCAAGCATCTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCGGTGGAC 35026 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2956 CCGGCCAAGCATCTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCTGTGGAC 3015 Query 35027 GAGACGGTCTACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACGAACACCAGCGAG 35086 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3016 GAAACGGTCTACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACGAACACCAGCGAG 3075 Query 35087 GGCCAACTGGCCCCGGCGCTGGCCGCCACTGACAGCCTCACGCTGACGGGGCGCCAGGGT 35146 ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct 3076 GGCCAACTGGCCCCGGCGCTGGCCGCCACCGACAGCCTCACCCTGACCGGGCGCCAAGGT 3135 Query 35147 AAGCCGTATCCGCCCGGCCAATTCCGCATCAACGGTAGCGCGTACCCGGCGAAGGTCTAC 35206 |||||||||||||||||||| |||||||||||||| ||||||||||| |||| |||||| Sbjct 3136 AAGCCGTATCCGCCCGGCCAGTTCCGCATCAACGGCAGCGCGTACCCAACGAAAGTCTAC 3195 Query 35207 GGGGTGCTGTCGGTGAGCTGGGCGAAGCGCGACCGTATCGGCCAAGCCGACCAGTTGATC 35266 |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 3196 GGGGCGCTGTCGGTGAGCTGGGCGAAGCGCGACCGGATCGGCCAGGCCGACCAGTTGATC 3255 Query 35267 GATACCACGGTCGGCAACATCGGCCCGGAAGCTGGAGCGACGGTGACGCTCCAGGTCTAC 35326 ||||||||||||||||||||||| || |||| ||| |||||||| ||||||| ||| ||| Sbjct 3256 GATACCACGGTCGGCAACATCGGACCCGAAGATGGGGCGACGGTTACGCTCCTGGT-TAC 3314 Query 35327 AGCGG 35331 ||||| Sbjct 3315 AGCGG 3319 >seq301 Length=948 Score = 848 bits (940), Expect = 0.0 Identities = 478/483 (99%), Gaps = 0/483 (0%) Strand=Plus/Plus Query 7315 CCGCAGACCCGCGAGCAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 7374 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3 CCGCAGACCCGCGAACAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 62 Query 7375 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 7434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 122 Query 7435 GAGCCGGCCGAAGACCTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 7494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 GAGCCGGCCGAAGACCTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 182 Query 7495 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACG 7554 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACA 242 Query 7555 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 7614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 302 Query 7615 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGCTTCATCCGCACCAAGGAAGAGGTG 7674 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGCTTCATCCGCACCAAGGAAGAGGTG 362 Query 7675 AACAAGGAAGCGATCCTCAACGAACCCGAGGCTGTCCAGGGGCTGCCGGGGCTGACCCTG 7734 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 363 AACAAGGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTGCCGGGGCTGACCCTG 422 Query 7735 AACACGGGCATCGAAGACTTCGCCATCGTGCCTTTCGAAGCGGAGGTGCAGTGACATGGC 7794 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 423 AACACCGGCATCGAGGACTTCGCCATCGTGCCTTTCGAAGCGGAGGTGCAGTGACATGGC 482 Query 7795 CGA 7797 ||| Sbjct 483 CGA 485 Score = 342 bits (378), Expect = 1e-89 Identities = 197/201 (98%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 8157 AGGAGGTGTGACATGGCCCGCAACCGCGCGCAACAGCTGTGCATCGTCACCTTGGACTAT 8216 |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 749 AGGACGTGTGACATGGCACGCAACCGCGCGCAACAGCTGTGCATCG-CACCTTGGACTAT 807 Query 8217 CAGCGCTTCCTGTTACCCCAGGCTGATGCACTCAAGCTGATAGACATCATGAGTCGAGCC 8276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 808 CAGCGCTTCCTGTTACCCCAGGCTGATGCACTCAAGCTGATAGACATCATGAGTCGAGCC 867 Query 8277 GCAGAGGTTCAGGCCGACTACGCCTCTGGAGCTGGGTTCAAGTACACCGTCGGCGAAGTG 8336 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 868 GCAGAGGTTCAGGCCGACTACGCCTCTGGAGCTGGATTCAAGTACACCGTCGGCGAAGTG 927 Query 8337 CCGGAAGTCGAGTTGACGATA 8357 ||||||||||||||||||||| Sbjct 928 CCGGAAGTCGAGTTGACGATA 948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119419933153448