Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5122 122 1e-22 >seq5122 Length=22589142 Score = 122 bits (134), Expect = 1e-22 Identities = 187/264 (71%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 181805 GTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTT 181864 ||||||||| ||| | | || |||||||||||||| | ||||||||| || || ||||| Sbjct 4847009 GTCTTTACCTCCCGTCAAGCGGGTACCAAATTGACCGCGTGGCTCAAGCAGATTGATGTT 4846950 Query 181865 GTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGT-ATCCGCAAGGGACACTTCAC 181923 ||| | ||| | | | | ||||| || ||||| || ||| ||| |||| || || | Sbjct 4846949 GTTGGCACCCACAAAATTCTGGGCCAGATTCACGATTGTCATCTGCA-GGGATACCTCTC 4846891 Query 181924 CGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCAT 181983 |||||||||| || ||| | || || || || | | | ||| || ||||||| ||| Sbjct 4846890 CGTGGTGGTAGGCCGACATCTCTGCCACCGATCCGGATAGCTGGGCTACCTTCACCTCAC 4846831 Query 181984 CTTTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCAT 182043 ||| ||| | | ||||||| |||||||||||| ||| ||||| | |||| Sbjct 4846830 GCTTGTCGTTTCTCTTAAAGCAAGTGAACATCACTTTCCGCTGACCCGGCTTTAAGCCAT 4846771 Query 182044 CCGCCATATGGGCAATAGAGCGCT 182067 || | | | | ||| ||||||| Sbjct 4846770 CCACTAGACTAGGAATGGAGCGCT 4846747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627991774550400