Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_028667.1 Length=39593 Score E Sequences producing significant alignments: (Bits) Value seq3473 396 7e-106 >seq3473 Length=3319 Score = 396 bits (438), Expect = 7e-106 Identities = 979/1456 (67%), Gaps = 32/1456 (2%) Strand=Plus/Plus Query 33018 CCGGCCAGCCGTCGCCGCCGTTGCCGTTCGCGGCGCTGCAGGAGCGCATCTGGACTGTG- 33076 |||||||| ||||||||||| || || || || ||| |||| |||| ||||| || Sbjct 1 CCGGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAGGAACGCACTTGGACCGTCA 60 Query 33077 GCCGTGTCGACGGATGGACCGCCGGTAGTGGACGCGCGCATCGTCTGGCAACTGCAGGAC 33136 || || | ||||| || ||||| || || | ||||| ||||||||| || |||| | Sbjct 61 GCATTGGC-ACGGACGGCCCGCCCGTCGTCAATGCGCGGATCGTCTGGACGCTCCAGGGC 119 Query 33137 GAACAGCCGTTGATCCTAGTCATTACCGGAAACCGGATCACCGCGTGGCCGTTTGCGCCG 33196 || | | || |||| ||||| ||||| || || |||| ||| ||| | || |||||| Sbjct 120 GAGCCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCCTGGACCTTCGCGCCG 179 Query 33197 GACTGGGCTGATGGCGTGCAGGAGTCACTGGAGTGGTT-GACCGAGCTGCTGACCAGCAC 33255 ||||||| || || | ||| ||| || | | ||| | | ||| ||| Sbjct 180 GACTGGGGCGACAGCATCGTCGAGCGCCTG-AGCGCCTCGACAAATATCCTGCAAAGCGA 238 Query 33256 GTCGGGAGTCGAGCAACGGCGATCGCTGCGCCTGTCACCCCGGCGTTCATTCGAAGCTGA 33315 || | || || || || | |||||||| | || || || |||||||| | Sbjct 239 ATCAGCCGTGACCCAGCGCCGGGCTATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAA 298 Query 33316 GTTCTACGCGGAGGGGCGCGAGCGCGTGCTCCTCGATCTCAGCTTGGCCGGCTGGGGCGG 33375 | ||||||| | |||||||| |||||| || | | || |||||||||| Sbjct 299 CATGTACGCGGTAGACCGCGAGCGGCAGCTCCTGGACATGACGCTGTTTGGCTGGGGCGC 358 Query 33376 ACGAATCTGGGCACTGCCGGTGTGGCCGGACATACAACTGCTGGCAAGCGTCACCG-CGG 33434 ||||| ||||| |||||| | ||||| || || |||||||| |||| | | | ||| Sbjct 359 GCGAATTTGGGCGCTGCCGATTTGGCCTGATATCCAACTGCTC-CAAGAACCGCTGGCGG 417 Query 33435 CCGGAGCACA-AACGGTCGAGTGCGATACCCGCTGGCGGGATTTTCGTGCTGGCGGTCTT 33493 |||| | | ||| || |||||| || | | | || || || | |||||||| Sbjct 418 CCGGCTCGCTGAACATTCC-GTGCGACACGGTCGGCCTCGACTTCCGCGACGGCGGTCTG 476 Query 33494 GCGCTGCTGCGCGGTGAGTCAGCGTTCGAGTACGAGGTGGTTGAGATCCAGGATCTGACC 33553 ||| |||||||||| ||| || ||| || || || || ||| || ||| ||||| Sbjct 477 GCGATGCTGCGCGGCGAGGACGCCTTCACCTATGAAGTCGTCGAGGTCAAGGCAGTGACC 536 Query 33554 GCGTCTGCGATTCAGCTGGCCCGCCCTGTTCAGCGGCGCTGGCCGGCCGGCTCCCGCTTG 33613 || | | | | |||| |||||| || ||| |||| | ||||| || || Sbjct 537 GCCGCCGGCCTGGACCTGGTCCGCCCCGTCCAGGCCACCTGGGTAACTGGCTCGCGACTG 596 Query 33614 TACCCCATTCGCACCGCACAGCTGACGGAGCAACCGGCGCTGACCCGGCTGACCGACACC 33673 ||||| | |||||||| |||||||| || || || ||||||||||||||||||| ||| Sbjct 597 TACCCGGTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATACC 656 Query 33674 CTCTACAGCGCACAAGCGCGGTTCCTGGTGATGGACAGCAGCGATTGGCCGGAGGTCATG 33733 | || | | | ||||||| | ||||| ||||| ||||| ||||| ||| Sbjct 657 GCGCAGTCTGCGCGGGTGTCGTTCCTGATAATGGAGCCCAGCGCCTGGCCCGAGGTAATG 716 Query 33734 CCGACGACAACGTACCGGGGCTGGCCTGTCCTCGAGCAGCGGCCCGAAGAGTCCGAAGAC 33793 ||| |||| || ||| |||| |||| || || |||||||| || || || ||||||| Sbjct 717 CCGGCGACGACCTACAGGGGGCGGCCAGTGCTGGAGCAGCGCCCGGACGAAAGCGAAGAC 776 Query 33794 TTGTCCCTGTCGTATCAGCGCCTGCTCGATGTCCTGGACAACGAAACCGGCCTGCCGCAA 33853 | || |||||||||||||| ||||||||||| | || | || | Sbjct 777 CTCACCTCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCGC 836 Query 33854 TTCGCCGACCAAGCTGGGGTCGGTTTCCCGGTGCAT-GGCTTCCGCTGGCAGACCGAGGG 33912 | ||||| || ||| | | | || || ||| || |||||| | ||| Sbjct 837 GTGACCGACGTCGCCGGGATGGCGCTGCCCGT-CATCGGTCATCGCTGGATCGGCATGGG 895 Query 33913 CCGAGAGGAGCACGCGGCGCTGCGCAGCCTGCTGTACGCCCTGCGCGGCCGACAGAAAGC 33972 ||||| |||| ||||| | ||||||||| | || || ||||| |||| ||||| | Sbjct 896 CCGAGCCGAGCGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTGCGAGGCCAGCAGAAGCC 955 Query 33973 GATCTGGATTCCGACCCATGCCGCCGACCTGGTGCTGGTCGACACAG--TGGCTGC-GAC 34029 | | ||| | |||||||| |||| ||||||| || |||| ||| | | || || | | Sbjct 956 GCTATGGGTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGTC 1015 Query 34030 CAGCTCCGTCCTCGATGTCGAGCTGT-GCGGCTTGGCGCGGTTCTTCA--GGTCTGATGC 34086 || || || || || || | || | ||||| || || ||| || || | || Sbjct 1016 CA-CTGCG--CTGGACGT-GCGCAATATCGGCTATGCCCGTTTCGCCAATGGGC-GA--- 1067 Query 34087 TCCCGGCCGGCGCGATATCCGCATTGAGCTGTTCGGCGGGCAGGTCTTCCACCGCCGCAT 34146 || || || |||||||||||||| ||||||| || ||| |||| ||||||||||| Sbjct 1068 -CCGGGTCGTCGCGATATCCGCATCGAGCTGTACGACGGCACCGTCTATCACCGCCGCAT 1126 Query 34147 CCTCGACGTCAGCGAGCTGAACGTCGACGTCGAGCGCCTGGCGATCGACAGCGCGCTGGG 34206 ||| | || ||||||| ||| |||| ||||||| |||| |||||| ||| ||||| Sbjct 1127 TCTCACCAGCACCGAGCTGGACGCCGACACCGAGCGCTTGGCCATCGACGCCGCCCTGGG 1186 Query 34207 CAGCGTTGTCCGGCCGAGCGACGTCGCACGCATCTCGTTCATGACCCTGTGCCGGCAGGA 34266 | || | ||| ||||| ||| || || ||||||| |||||| | || || | | Sbjct 1187 CCGCCTGGTCGAGCCGACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCGC 1246 Query 34267 CAGCGACAGCGTGCAGATCACACACGAAACCGACACCGACGGCATCAGCACAGCCAGCAC 34326 ||||||| || |||| |||| ||||| | ||| ||| || || ||| || | Sbjct 1247 CAGCGACGTGGTCGAGATTGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCC-GCGC 1305 Query 34327 -GGTGTTCCGAGGAGTACG---CGATGAGCTTCAGTGATCGCGAGCGGTCCCTCGCCGAT 34382 | ||| ||| || || ||||||| || | ||||| | || ||||| ||| Sbjct 1306 TGACATTCAAAGGGGTTCGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGAT 1365 Query 34383 GGCCAGGCGATCAGCTTGTACGACTTCCGCCTCGGCCCGATCCGATGGACTTACACCA-C 34441 || ||| || | | ||||| | ||| ||| ||| ||||||| |||| |||| || | Sbjct 1366 GGGCAGCCGGTGCGGCTGTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGC 1425 Query 34442 CGCGAATCGAGACATC 34457 ||| | || |||||| Sbjct 1426 AGCG-ACCGGGACATC 1440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126568298166840