Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_030908.1 Length=36938 Score E Sequences producing significant alignments: (Bits) Value seq3473 2167 0.0 seq301 854 0.0 >seq3473 Length=3319 Score = 2167 bits (2402), Expect = 0.0 Identities = 1344/1439 (93%), Gaps = 0/1439 (0%) Strand=Plus/Plus Query 30312 GGCCAGGCGTCGCCGCCGCTGGGTTTCGCCGCCCTGGAGGAACGCACCTGGACCGTCAGC 30371 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 3 GGCCAGGCGTCGCCGCCGCTGGGTTTTGCCGCCCTGGAGGAACGCACTTGGACCGTCAGC 62 Query 30372 ATTGGCACGGACGGCCCGCCCGTCGTCAATGCGAGGATCGTCTGGAGACTCCAGGGCGAG 30431 ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 63 ATTGGCACGGACGGCCCGCCCGTCGTCAATGCGCGGATCGTCTGGACGCTCCAGGGCGAG 122 Query 30432 CCGAACCTGGTCCTGGTCATCACTGGCAATCGCATCATCGCCTGGACGTTCGCACCGGAC 30491 ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 123 CCGGACCTGGTCCTGGTCATCACCGGCAATCGCATCATCGCCTGGACCTTCGCGCCGGAC 182 Query 30492 TGGGGCGACAGCATCGTCGAACGCCTGAGCGCATCGACAAATATCCTGCAAAGCGAATCG 30551 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 183 TGGGGCGACAGCATCGTCGAGCGCCTGAGCGCCTCGACAAATATCCTGCAAAGCGAATCA 242 Query 30552 GCCGTGACCCAGCGCCGAGCCATGCGCCTGGCGCCGCGCCGAGAGTTCGACGCGAACATG 30611 ||||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||| Sbjct 243 GCCGTGACCCAGCGCCGGGCTATGCGCCTGGCGCCGCGCCGGGAGTTCGAAGCGAACATG 302 Query 30612 TACGCGGTGGATCGCGAGCGGCAGCTGCTGGACATGACGCTGTTCGGCTGGGGCGCGCGC 30671 |||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 303 TACGCGGTAGACCGCGAGCGGCAGCTCCTGGACATGACGCTGTTTGGCTGGGGCGCGCGA 362 Query 30672 ATTTGGGCGCTGCCGATCTGGCCTGATATCCAGCTGCTCCACCAGCCGCTGGCGGCCGGG 30731 ||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct 363 ATTTGGGCGCTGCCGATTTGGCCTGATATCCAACTGCTCCAAGAACCGCTGGCGGCCGGC 422 Query 30732 TCGCTGGGCATTCCGTGCGACACGGCCGGCCTCGACTTCCGCGACGGCGGTCTAGCGATG 30791 |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 423 TCGCTGAACATTCCGTGCGACACGGTCGGCCTCGACTTCCGCGACGGCGGTCTGGCGATG 482 Query 30792 CTGCGCGGTGAGGACGCTTTTACTTATGAGGTCGTCGAGGTCAAGACGGTGACCGCCAGC 30851 |||||||| |||||||| || || ||||| ||||||||||||||| | ||||||||| | Sbjct 483 CTGCGCGGCGAGGACGCCTTCACCTATGAAGTCGTCGAGGTCAAGGCAGTGACCGCCGCC 542 Query 30852 GGCCTGGACCTGGTCCGGCCCGTCCAGGCTGCCTGGAGAACTGGCTCCCGGTTGTACCCG 30911 ||||||||||||||||| ||||||||||| ||||| ||||||||| || |||||||| Sbjct 543 GGCCTGGACCTGGTCCGCCCCGTCCAGGCCACCTGGGTAACTGGCTCGCGACTGTACCCG 602 Query 30912 GTACGCACCGCGCAGCTGACCGAGCAGCCCACGCTGACCCGGCTGACCGATACCGCGCAG 30971 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 603 GTGCGCACCGCGCAGCTGACCGAACAGCCCACGCTGACCCGGCTGACCGATACCGCGCAG 662 Query 30972 TCTGCGCGGGTGTCGTTCCTGGTGATGGAACCCAGCAGTTGGCCCGAGGTGATGCCGGCG 31031 ||||||||||||||||||||| | ||||| |||||| ||||||||||| ||||||||| Sbjct 663 TCTGCGCGGGTGTCGTTCCTGATAATGGAGCCCAGCGCCTGGCCCGAGGTAATGCCGGCG 722 Query 31032 ACGATGTACCGGGGGCGTCCTGTCCTGGAACAGCGCCCGGACGAAAGCGAAGACCTCACC 31091 |||| ||| ||||||| || || ||||| |||||||||||||||||||||||||||||| Sbjct 723 ACGACCTACAGGGGGCGGCCAGTGCTGGAGCAGCGCCCGGACGAAAGCGAAGACCTCACC 782 Query 31092 TCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCGCGTGACC 31151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 783 TCCAGCTATCAGCGCCTGCTGTCCACCCTGGACAACGGCAGCGCGATTCCCCGCGTGACC 842 Query 31152 GACGTCGCCGGCATGGCGCTGCCCGTCATCGGCCATCGCTGGATCGGTATGGGCCGAGCC 31211 ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 843 GACGTCGCCGGGATGGCGCTGCCCGTCATCGGTCATCGCTGGATCGGCATGGGCCGAGCC 902 Query 31212 GAGCGGTCGGCGTTCCGTAGCCTGGTCTATGCGCTGCGCGGCCAGCAGAAGCCGCTATGG 31271 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 903 GAGCGGTCGGCGTTCCGCAGCCTGGTCTATGCGCTGCGAGGCCAGCAGAAGCCGCTATGG 962 Query 31272 GTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGTCCACCGCG 31331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 963 GTGCCGACCCACGCCGACGACCTGACCCTAGTCGCCACCGTCTCGCAGCTGTCCACTGCG 1022 Query 31332 CTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAACGGCCGGCCGGGCCGTCGCGAT 31391 |||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct 1023 CTGGACGTGCGCAATATCGGCTATGCCCGTTTCGCCAATGGGCGACCGGGTCGTCGCGAT 1082 Query 31392 ATCCGCATCGAGCTATACGACGGCACGGTCTATCACCGCCGCATCCTCACCAGCACAGAG 31451 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct 1083 ATCCGCATCGAGCTGTACGACGGCACCGTCTATCACCGCCGCATTCTCACCAGCACCGAG 1142 Query 31452 CTGGACGCCGACACCGAGCGCTTGGCCATCGATGCCGCCCTGGGCCGGCTGGTCGAGCCT 31511 |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 1143 CTGGACGCCGACACCGAGCGCTTGGCCATCGACGCCGCCCTGGGCCGCCTGGTCGAGCCG 1202 Query 31512 GGTGACGTGGCGCGCATTTGTTTCATGGCGCTCTGTAGCGCCGCCACCGACGTGGTCGAG 31571 || || |||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 1203 ACCGATGTAGCGCGCATCTGTTTCATGGCGCTCTGTAGCGCCGCCAGCGACGTGGTCGAG 1262 Query 31572 ATCGAGCACGTCACCGATAGCGAGGGCGTAGCAACTGCCGCCCTGACGTTCAAAGGGGTT 31631 || |||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||| Sbjct 1263 ATTGAGCACGTCACCGATAGCGAGGGCGTCGCAACCGCCGCGCTGACATTCAAAGGGGTT 1322 Query 31632 CGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGGCT 31691 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1323 CGTGACGATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGGCT 1382 Query 31692 GTACCAGTTCAGCCGTGGAGCCATCCGCTGGAGCTACAACAGCAGCGACCGGGACATCA 31750 |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 1383 GTACCAGTTCAGCCGTGGCGCGATCCGCTGGAGCTACAACAGCAGCGACCGGGACATCA 1441 Score = 1169 bits (1296), Expect = 0.0 Identities = 734/785 (94%), Gaps = 7/785 (1%) Strand=Plus/Plus Query 34128 GACCGGACGCCTCGGGCGATCACTGTGCGCCGCCTGATCGAGGCACCCTATCGCGAACTG 34187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2536 GACCGGACGCCTCGGGCGATCACTGTGCGCCGCCTGATCGAGGCACCCTATCGCGAACCT 2595 Query 34188 GCC---GGCGTGATCGATCC-GGCGAATCTCCAGCTCCTGGACGTGAGCGCGTCCT-ATT 34242 ||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| | | Sbjct 2596 GCCCCGGGCGTGATCGATCCCGGCAAATCTCCAGCTCCTGGACGTGAGCGCGTCCTTACT 2655 Query 34243 TGGCCGCGCTGGCC-GAGGCGCCGACCAGCCTGTCGCAGAGCTACACACTGACCGACCGC 34301 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2656 TGGCCGCGCTGGCCCGAGGCGCCGACCAGCCTGTCGCAGAGCTACACACTGACCGACCGC 2715 Query 34302 GTCGGCAGCTCTGGCGCGTTCGTTGATCGCGGAACCGGGGACTGGTGCCCGACCGGATTA 34361 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct 2716 GTCGGCAGCTCTGGCGCGTTCGTTGATCGCGGAACCGGCGACTGGTGCCCGACCGGACTA 2775 Query 34362 CTCGCCGCCGAGCTGCCGCTAGCGGCCGGCCCGAGCGTCGTCACGCTGACGAACACTAGT 34421 |||||||||||||||||||| |||||||| |||| |||||||||| |||||||| | || Sbjct 2776 CTCGCCGCCGAGCTGCCGCTGGCGGCCGGTCCGAACGTCGTCACGTTGACGAACGCCAGC 2835 Query 34422 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCTGTGGTGGACGACGAGATAGTCCGGGTC 34481 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 2836 CGGCTGGAGGACGTCACTGTCGGCCAGGCCGCAGTCGTGGACGACGAGATAGTCCGGGTC 2895 Query 34482 GATGCGGTCAACTATGCCAGTGGCACAGTCACCCTGGCGCGCGGCTGTGCCGATACCGTA 34541 |||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||||||||| Sbjct 2896 GATGCGGTCAACTACGCCAGCGGCACGGTCACCCTCGCGCGCGGCTGCGCCGATACCGTA 2955 Query 34542 CCGGCCAAACACCTGGCCGGGGCTCGGCTCTGGTTCTACGACACGTTCGAAGCGGTGGAC 34601 |||||||| || ||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct 2956 CCGGCCAAGCATCTGGCCGGGGCTCGGGTCTGGTTCTACGACACGTTCGAAGCTGTGGAC 3015 Query 34602 GAGACGGTCTACAGCCAGGGCGTGACCCTACAGGCCAGGCTGCTGACGAACACCAGTGGC 34661 || ||||||||||||||||||||||| || |||||| ||||||||||||||||||| | Sbjct 3016 GAAACGGTCTACAGCCAGGGCGTGACGCTCCAGGCCCGGCTGCTGACGAACACCAGCGAG 3075 Query 34662 GGCCAGCTGGCCCCGGCGCTGGCCGCCACTGACAGCCTCACCCTGACCGGGCGCCAGGGT 34721 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 3076 GGCCAACTGGCCCCGGCGCTGGCCGCCACCGACAGCCTCACCCTGACCGGGCGCCAAGGT 3135 Query 34722 AAGCCGTATCCGCCCGGTCAATTCCGCATTAACGGCAGCGCGTACCCAACGAAAGTCTAC 34781 ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct 3136 AAGCCGTATCCGCCCGGCCAGTTCCGCATCAACGGCAGCGCGTACCCAACGAAAGTCTAC 3195 Query 34782 GGGGCGCTGTCGGTGAGCTGGGCGAAGCGCGACCGCATCGGCCAAGCCGACCAGTTGATC 34841 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 3196 GGGGCGCTGTCGGTGAGCTGGGCGAAGCGCGACCGGATCGGCCAGGCCGACCAGTTGATC 3255 Query 34842 GATACCACGGTCGGCAACATCGGCCCGGAAGCTGGGGCGACGGTAACGCTCCAGGTCTAC 34901 ||||||||||||||||||||||| || |||| |||||||||||| ||||||| ||| ||| Sbjct 3256 GATACCACGGTCGGCAACATCGGACCCGAAGATGGGGCGACGGTTACGCTCCTGGT-TAC 3314 Query 34902 AGCGG 34906 ||||| Sbjct 3315 AGCGG 3319 >seq301 Length=948 Score = 854 bits (946), Expect = 0.0 Identities = 479/483 (99%), Gaps = 0/483 (0%) Strand=Plus/Plus Query 6879 CCGCAGACCCGCGAACAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 6938 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3 CCGCAGACCCGCGAACAGGTCATCAGCGATATCAAGAACATCGGCGACCTCCAGCGCGAG 62 Query 6939 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 6998 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 CTGGCCCGTCTGGAAACCGCAATGAACGATGAAATCGGCCAGATCACCGAGCGCTATTCG 122 Query 6999 GAGCCGGCCGAAGACCTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 7058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 GAGCCGGCCGAAGACCTGAAGAAGCGCCTGGCGGTCCTCCAGGGCGGAGTCCAGTCCTGG 182 Query 7059 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACG 7118 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 TGCGAGGCCAACCGTGCCGAGCTGACCGACAACAACAAGGTCAAGTACGCGAACCTCACA 242 Query 7119 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 7178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 ACCGGCGAGGTCCAGTGGCGCATCCGTCCCCCGTCCGTGACTGTGCGCGGCGCCGATGCG 302 Query 7179 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGCTTCATCCGCACCAAGGAAGAGGTG 7238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 GTCCTGGAGCTACTGCGCAGCAAGGGGCTAATCCGCTTCATCCGCACCAAGGAAGAGGTG 362 Query 7239 AACAAAGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTTCCGGGGCTGACCCTG 7298 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 363 AACAAGGAAGCGATCCTCAACGAACCCGAGGCCGTCCAGGGGCTGCCGGGGCTGACCCTG 422 Query 7299 AACACCGGCATCGAAGACTTCGCCATCGTGCCTTTCGAAGCGGAGGTGCAGTGACATGGC 7358 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 423 AACACCGGCATCGAGGACTTCGCCATCGTGCCTTTCGAAGCGGAGGTGCAGTGACATGGC 482 Query 7359 CGA 7361 ||| Sbjct 483 CGA 485 Score = 268 bits (296), Expect = 2e-67 Identities = 240/300 (80%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 7722 GGAGGTG---TGACATGGCCGACACCATCGCTTTCTGCTGGGCCTCTGGCCTGATCCAGT 7778 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 464 GGAGGTGCAGTGACATGGCCGACACCATCGCTTTCTGCTGGGCCTCTGGCCTGATCCAGT 523 Query 7779 TCGGTGACCAGGTTCCCGAGGGCGCCATCGAGATCGCCCGTGGGGACGACCAGGTCGTTC 7838 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 524 TCGGTGACCAGGTGCCCGAGGGCGCCATCGAGATCGCCCGTGGGGACGACCAGGTCGTTC 583 Query 7839 GCGAAATCATCGAAGTCACCTCGCGCCACGCCTACGACGGCAAGTCGCTCCTGGTGCCCG 7898 |||||| | ||| || ||||| ||||| |||||| | |||||||||||| || | Sbjct 584 GCGAAAACCTCGTGACCAATTCGCGGCACGCTTACGACAACGTGTCGCTCCTGGTTCCGG 643 Query 7899 GCATACCCGAGGCAAAAAACCAGGCGGAAGGCATTGAAGCCCTCGAAAGGTTCGTTCGCT 7958 || ||||||| || |||||| | || ||| || || || || | ||| | || Sbjct 644 GCGTACCCGAAGCGGCAAACCAAACCGAGGGCGGGGACGCACTGGAGTGCTTCATCCGTC 703 Query 7959 GGATCGCCTCGCACGACAGCGAGTCGTTCCAGGT---TTTCATGGGAGACGTGTGACATG 8015 ||||| | ||||||||| | |||||||| || ||| ||||||||||||| Sbjct 704 TTCTCGCCAAGTACGACAGCGCCGCTTTCCAGGTCGCTTATGTGGAGGACGTGTGACATG 763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118072815127200