Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5124 453 2e-122 >seq5124 Length=26641161 Score = 453 bits (502), Expect = 2e-122 Identities = 1223/1858 (66%), Gaps = 22/1858 (1%) Strand=Plus/Plus Query 76767 TTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTAC 76826 || ||||| | || || |||||||| | | | || || ||||| || ||||||||| Sbjct 10932357 TTCTTCTTGTTCACGGTGAACTGAATGGCATTCGCAGCTGGCTTTGTGCGCAGATAGTAC 10932416 Query 76827 ATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAA 76886 || || ||||| ||||| |||| ||| || || ||| |||||||| ||| Sbjct 10932417 ATTCCGGTTTTAAGACCAGCTTTCCAGGAGTAAAAGTGTATGGAGGTCAGTTTTCCATAG 10932476 Query 76887 CTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCA 76946 | || || || | |||||| || | ||||||||| ||||| ||||| || || | || Sbjct 10932477 TTGGGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCACCACGGTCG 10932536 Query 76947 GCCGCCATTTTTATAATGGTCTTT--TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTT 77004 || |||||||| || ||| ||| |||| |||||||| | || ||| | | | Sbjct 10932537 GCGGCCATTTTAATCGTGGACTTAACTGAG--ATTTCCCACACCGTCTTGTACAGATCGC 10932594 Query 77005 TGATATCATCTGG---AAGGTTTGTAT--TTTGAATGGAACCACCATCTG-ATATAATTG 77058 || | | ||||| | || | || |||| || || || || ||| |||| || Sbjct 10932595 -GA-ACCCTCTGGGGGATGGCCTCAATGTTTTGGATTGAGCC-CCTGCTGGATATGATCT 10932651 Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118 ||||| || || || | |||||| | | |||||||| | | | | |||| | | Sbjct 10932652 GGTTCTTCATGTCGTCGTCCCACAAGTCCAGCTCTGTTAGGTCGCGCAACAAATGATGGT 10932711 Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178 | || | ||||| || || |||| |||| | ||||| || || ||||||| || | Sbjct 10932712 TGACCACCTGAAACTCGCCGGACAGAACTCGCCTGGTGTATATGTTCGTGGTATAGGGCT 10932771 Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238 | | ||||||||||| |||| |||||||| ||||| ||||| ||||| || || |||| Sbjct 10932772 CGAAGGATTCATTGTTGCCCATTATTTGAGCTGTAGATGCAGTGGGCATTGGAGCAACCA 10932831 Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298 | || | || ||| || | |||| || || || | | ||| ||||||| Sbjct 10932832 GCAGGGAGTTGCGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAA 10932891 Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358 | | | || || ||||| | ||||| || | |||||| || || | | Sbjct 10932892 GGTTCGTTGGGACCTTGTCCCACATGTCGTACTGCAAAATTCCCTTGCTCACCGGGCTGC 10932951 Query 77359 CATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTC 77418 | | ||| ||||| ||||| ||||| || | || |||||||| || |||||||| |||| Sbjct 10932952 CCTCATAGGTTTCGTAAGGGCCTTCGGTCTGGGCCAGTTCACAGCTGGCTTCCAAGGCTC 10933011 Query 77419 CGTAATAAATTGTTTCGAAAATCTTCTTATT---GAGATCTTGTGCTTCAATACTATCAA 77475 | || ||||| |||||||| |||| || ||| ||| | ||||| ||| ||| Sbjct 10933012 CATAGTAAATGGTTTCGAATATCTGCTGATTCAACAGACC---GGCTTCTTCACTTTCAT 10933068 Query 77476 ACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTC 77535 |||| | | | ||||| ||||| || || |||||||||| || || || | || | Sbjct 10933069 ACGGGAATCGCATGAGAATCAAGGCGTCAGCGAATCCCTGAATACCTATGCCCACGGGAC 10933128 Query 77536 TATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTT 77595 || ||| ||| || | | || ||||| | |||||||| || || || || || | Sbjct 10933129 GGTGCCTCAAATTTGACTTCCTTGCCTCTGGCAAGGGATAATAGTTGATATCAATTATCT 10933188 Query 77596 TATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA--TCT 77653 | || |||||||| ||||| || || ||||| || || |||||| | ||| Sbjct 10933189 TGTTTAGATTTCTGGTAACTATCTTGGTGACTTCCTTGAGCTTCTTGAAATCATACGTCT 10933248 Query 77654 TC-CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712 || | | | ||||||||||| | || || ||||| | || || || |||| ||||| Sbjct 10933249 TCTCCGGTGTGACAAACATGTTGAGGGCAATGGATGCCAAGTTGCAGACAGCTATCTCAT 10933308 Query 77713 TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGAT 77772 | || |||| | || || || || | || || || ||||| ||||| | || Sbjct 10933309 CCGGCGCGGAGTATTCAACGATTTCCGTGCACAAGTTGCTGCACTTGATGGTGCCAACAT 10933368 Query 77773 TTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTT 77832 | || ||||||||||| | ||||| | |||||| | || || ||||| | || |||| Sbjct 10933369 TCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGAAGAGCATGTACGGATTTCCAGTTT 10933428 Query 77833 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATC 77892 | | || | || || || | | ||| | | | ||| || | | | ||| || Sbjct 10933429 CCACTTGCGCCTCAATGATGGCATACCACAGGGATTGAGCCTTAACCGTTCGGTTGGCTC 10933488 Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA 77952 | | |||| || |||| ||| ||| ||| |||||||| ||||| ||||| | | Sbjct 10933489 GACCCTCTTGCTCGTATTTCTCATACAGCTTTTCGAATTCATCGCCCCACACATCTTGGA 10933548 Query 77953 ATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCA 78012 |||||||||| | |||||||| | ||||| ||||| | ||| || || |||| Sbjct 10933549 GGCCAGGGCATTTGTGGGGGCACATGAGCGACCAATCACCGTTGGCCTCCACGCGCTTCA 10933608 Query 78013 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTC 78072 | |||||||| |||||||| ||||| ||| ||||| |||| | || ||||| || | Sbjct 10933609 TGAAGAGATCGGGTATCCACAGAGCGTAAAACAGATCGCGGGCGCGATTCTCTTCCTTGC 10933668 Query 78073 CTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 78132 | || || || || || ||||| ||||| | | ||| || ||||| || || || || | Sbjct 10933669 CCGTGTTTTTCTTTAGTTCGAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAA 10933728 Query 78133 TTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTAT 78192 | || | | || || || || |||||||| || | ||| | || || || Sbjct 10933729 TGGCAAAGGCACCGGGACGCTTGCCGCCTCCCTGGTCCACATAACGCGCCACATTGTTGA 10933788 Query 78193 AAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252 | || || | ||| |||| | || || || ||||| ||||| || |||| | | | Sbjct 10933789 AGACCCTGAGCATGGGAACCAACCCATTGGACGTTCCGTTTGTGCCGCAAATCGAGGTGC 10933848 Query 78253 CACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | |||| ||||| | | | | || || || || || ||| || || | | Sbjct 10933849 CCTTTGCACGAATGCAATGCACGTTGAGTCCAATGCCACCAGCAGACTTGGAGATCATGG 10933908 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372 |||| | | || | | | || ||||| || ||| | ||||| | ||||| | Sbjct 10933909 CGCACTGCTCCACAGACTTAAAAATGCCCTCGATTGAGTCGGCAGTCATGGTCAGAAGGA 10933968 Query 78373 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432 |||| |||| || | | || | ||| ||| | || || |||||||||| Sbjct 10933969 AACACGACGACAGCTGCGGGCGGTTTGTGGCAGCAGCAAACAGCGTGGGCGATGCATGCG 10934028 Query 78433 TAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGAT 78492 |||| | || || || |||||||| ||||| | || | ||||| ||| | || Sbjct 10934029 TAAAGTAGCGCTCCGATAGAAGATTGTAGGTTTCCACGGCCGCATCTATATCCTCTCCAT 10934088 Query 78493 GAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTA 78552 | ||||| | ||| || ||||||| ||||||||| |||| || | |||| ||| Sbjct 10934089 GGATTCCGATCGCCACGCGCATCAGCATATGCTGCGGTCGCTCTGCGATCTTTCCGTTTG 10934148 Query 78553 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 78610 | || | | || || |||| ||| ||||| ||||||||||| || |||||| Sbjct 10934149 TCTTGAGGAGATAGGAACGCTCCAGAGTCTTAAAGCCAAAATAGTTATAGCCAAAGTC 10934206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694624306463360