Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4563 181 1e-40 >seq4563 Length=5383265 Score = 181 bits (200), Expect = 1e-40 Identities = 424/635 (67%), Gaps = 20/635 (3%) Strand=Plus/Minus Query 145646 TGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGT 145705 |||||||||| || || | | |||||| ||| |||||||| || ||||| || | Sbjct 3137488 TGGGAAAGGGTCGTGGTGTACGTTCCAGCTGCTCCTTAAGGGGCTCTACATGGTTCAGAT 3137429 Query 145706 AGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGG 145765 ||||||| | ||| |||| | ||| | ||||| || |||| || ||||| | |||| Sbjct 3137428 AGACGTGTGTGTCGCCCATGGTGTGCACAAAGTCGCCCGGCTTCAGACCCGTCACATGGG 3137369 Query 145766 CGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGT 145825 ||| ||||||||| || |||| |||| ||| |||||||||||||| |||| ||||||| Sbjct 3137368 CGATCATGTAGGTAAGGAGGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAAGCCCATGT 3137309 Query 145826 CCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC----CCCGCC--CGCCACGTAGAACT 145879 | | | ||||| |||||||| || ||||| | | | | |||||||||| Sbjct 3137308 CGGCGCTCCTTTGGTAGAGCTGGCACGAAAGCTCATTTCGGGTCTGTGAGACGTAGAACT 3137249 Query 145880 GGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGG 145939 | |||| |||||| ||||| || ||||| || | |||| || ||||| || | Sbjct 3137248 GCGCCAGGCAGTGGCACGGCGGAAGAGCCATCTTTGGAATGTCCAATGGATTCCACGCTG 3137189 Query 145940 TGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCT 145999 | | || | |||| | ||||| |||| || | |||| | | | | Sbjct 3137188 ACATAATGATACGCCTGTCCGAAGGGTTATTCTTAATGGTGTCGATCACTTGACGCAATT 3137129 Query 146000 GGTCCACGCCCTGCCCCCGGTAATCTGTCTT-GGAGTCCACGTACGCGGCCCCGAAGTGC 146058 |||| | ||||| || ||||| ||||| | || | ||||| | || || |||||| Sbjct 3137128 GGTCGATGCCCTTGCCGGCATAATC-GTCTTCGCAGCTCCCGTACTCCGCACCAAAGTGC 3137070 Query 146059 CTCCACTGGAACCCGTAGACGGGCCCCAGGTCCC---CGG---GCTCCCTGTGCCCCAGC 146112 | ||||||||| ||||| || || |||| ||| | ||| |||| |||| |||||| Sbjct 3137069 CGCCACTGGAATCCGTACACCGGACCCAAGTCGCCAACGGCTCGCTCTGTGTGACCCAGC 3137010 Query 146113 CCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCG 146172 | || | ||| |||| || | ||| | |||||||| | ||| | |||| Sbjct 3137009 TTGTCC------AAGAACTCCCTGGTGCTGTTCCCATCCCAGATATGCACGTTCTTCGCC 3136956 Query 146173 GAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCC 146232 ||| |||| ||| || ||| | |||||||| ||||| ||| || | Sbjct 3136955 TGCAGCAGCTTGGCGTCTGTCTTGCCCGCCACAAACCAGAGTAGCTCCTCGGCCACAGCG 3136896 Query 146233 CTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 | ||||||| | ||| ||||| | ||||| || Sbjct 3136895 CGGAAGAAGACGCGCTTTGTGGTTAATAGGGGAAA 3136861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590040318501840